| Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006539132.1 | Gene: | Spen / 56381 | MGIID: | 1891706 | Length: | 3644 | Species: | Mus musculus |
| Alignment Length: | 409 | Identity: | 99/409 - (24%) |
|---|---|---|---|
| Similarity: | 144/409 - (35%) | Gaps: | 95/409 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 TFKLFIGNLDEKTQATELRALFEKYGTVVECDV-----VKNYGFVHMETEQQGRDAIQNLNGYTL 65
Fly 66 NEFAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVEC--DIVRNYGFVHLDC 128
Fly 129 VGDVQDAIKELNGRVVDGQPLKV-------QVSTSRVRPKPGM---------------------- 164
Fly 165 ----GDPEQCYRC--GRSGHWSKECPRLY-------GS---------AGGGREPPSPLSA--GGY 205
Fly 206 RDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDR-------RFEDSRDLYERRYQTSRMRDFP 263
Fly 264 PPPISRREPMP--LPPTLSGSLRSCSVSRGYDTMFSR----RSPPPPR----SSNGMSRYGSPTP 318
Fly 319 HGYEDFSRDAFDERMISSR 337 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 21/69 (30%) |
| RRM1_2_CoAA_like | 87..152 | CDD:409779 | 18/73 (25%) | ||
| hnRNP-R-Q | <88..>258 | CDD:273732 | 49/231 (21%) | ||
| Spen | XP_006539132.1 | RRM1_SHARP | 7..81 | CDD:240794 | |
| U2AF_lg | 128..596 | CDD:273727 | 45/161 (28%) | ||
| RRM2_SHARP | 338..411 | CDD:240795 | |||
| RRM3_SHARP | 438..511 | CDD:240796 | 22/71 (31%) | ||
| RRM4_SHARP | 512..588 | CDD:240797 | 22/80 (28%) | ||
| PTZ00121 | <635..1272 | CDD:173412 | 51/208 (25%) | ||
| PHA03247 | <1629..2063 | CDD:223021 | |||
| PHA03247 | <2122..2642 | CDD:223021 | |||
| Collagen_mid | <2641..>2722 | CDD:374271 | |||
| PHA03247 | <2949..3474 | CDD:223021 | |||
| SPOC | 3483..3642 | CDD:369497 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||