Protein Alignment lark and RBM23

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001339693.1
• Gene: RBM23 / 55147
• HGNCID: 20155
• Length: 483
• Species: Homo sapiens
• Alignment Length: 184
• Identity: 42/184 - (22%)
• Similarity: 70/184 - (38%)
• Gaps: 31/184 - (16%)

  Fly     5 GTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNLN 61
            |..:|::|:|........||.:||.:|.:....::|:        |||:.....:..|.|::.||
Human   305 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 369

  Fly    62 GYTLNEFAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVREL--------FQKYGTVVECDIV 118
            |:.|        |.:..|..:. |.::..|  ||.|.....:||        ||....:.|...:
Human   370 GFEL--------AGRPMRVGHV-TERLDGG--TDITFPDGDQELDLGSAGGRFQLMAKLAEGAGI 423

  Fly   119 RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYR 172
            :.............|.|..:|||.|    ||......:.....|.:....||::
Human   424 QLPSTAAAAAAAAAQAAALQLNGAV----PLGALNPAALTALSPALNLASQCFQ 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	18/72 (25%)
		RRM1_2_CoAA_like	87..152	CDD:409779	17/72 (24%)
		hnRNP-R-Q	<88..>258	CDD:273732	20/93 (22%)
RBM23	NP_001339693.1	SF-CC1	143..482	CDD:273721	42/184 (23%)