DRSC/TRiP Functional Genomics Resources

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Protein Alignment lark and LOC4576768

DIOPT Version :10

Sequence 1:NP_523957.1 Gene:lark / 38811 FlyBaseID:FBgn0011640 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_001237856.3 Gene:LOC4576768 / 4576768 VectorBaseID:AGAMI1_002317 Length:361 Species:Anopheles gambiae


Alignment Length:227 Identity:59/227 - (25%)
Similarity:94/227 - (41%) Gaps:59/227 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KLFIGNLDEKTQATELRALFEKYGTVVECDVV------KNYGFVHMETEQQGRDAIQNL---NGY 63
            |||:|.|..:|...:||..|.:||.:...:|.      ::.||..:  ..:..|:|..:   ..:
Mosquito    69 KLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFI--VYKASDSIDKVVAAGEH 131

  Fly    64 TLNEFAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RN 120
            .||...:..:.||:|..      |||||.||......|::..|.::||:||.::.        :.
Mosquito   132 VLNNKKVDPKRAKARPG------KIFVGGLTSDISDEEIKTFFGQFGTIVEVELPFDKQKNQRKG 190

  Fly   121 YGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKP-----GMGDPEQCYRCGRSGHWS 180
            :.|:..:.|..|.:.:|... :.:.|:.:.|:.:|    |||     |||        |..|   
Mosquito   191 FCFITYESVQVVNELLKTPK-QTIAGKEVDVKKAT----PKPDGQMGGMG--------GGGG--- 239

  Fly   181 KECPRLYGSAGGGREPPSPLSAGGYRDRMYGR 212
                  .|..||||       .|..|..|.||
Mosquito   240 ------MGMGGGGR-------GGNMRGGMPGR 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
larkNP_523957.1 RRM1_2_CoAA_like 8..73 CDD:409779 18/73 (25%)
RRM1_2_CoAA_like 87..152 CDD:409779 18/72 (25%)
hnRNP-R-Q <88..>258 CDD:273732 37/138 (27%)
LOC4576768XP_001237856.3 None

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