Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001002382.1 | Gene: | rbm34 / 436655 | ZFINID: | ZDB-GENE-040718-77 | Length: | 411 | Species: | Danio rerio |
Alignment Length: | 258 | Identity: | 58/258 - (22%) |
---|---|---|---|
Similarity: | 107/258 - (41%) | Gaps: | 72/258 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LFIGNLDEKTQATELRALFEKYGTVVEC----DVVKN----------------------YGFVHM 47
Fly 48 ETEQQGRDAIQNLNGYTLNE-FAIKVEAAKSRRAPNTPTTKIFVGNLT-DKTRAPEVRELFQKYG 110
Fly 111 TVVECDIVRN--------YGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKP----- 162
Fly 163 ---------GMGDPEQCYR--CGRSGHWSKECPRLYGSAGGGREPPSPLSAGGYRDRMYGRDP 214 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 18/90 (20%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 21/73 (29%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 38/152 (25%) | ||
rbm34 | NP_001002382.1 | RRM1_RBM34 | 149..240 | CDD:240840 | 18/90 (20%) |
RRM2_RBM34 | 253..325 | CDD:240841 | 21/73 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |