DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment lark and CG7903

DIOPT Version :9

Sequence 1:	NP_523957.1	Gene:	lark / 38811	FlyBaseID:	FBgn0011640	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_651755.2	Gene:	CG7903 / 43554	FlyBaseID:	FBgn0039730	Length:	384	Species:	Drosophila melanogaster

Alignment Length:	311	Identity:	84/311 - (27%)
Similarity:	120/311 - (38%)	Gaps:	53/311 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 NTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDG 146
            || |.|:|||:| .:.:..|:|.||..||:|||||::....||||:.....:.||..|||.:..|
  Fly     2 NT-TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKG 64

  Fly   147 QPLKVQVSTSRVRP------KPGMGD-----PEQC-------------------YRCGRSGHWSK 181
            ||:.|:....:..|      :||.||     |.|.                   :|....|.:|.
  Fly    65 QPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEVGGRFSN 129

  Fly   182 ECPRLYGSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDS 246
            |.||...|:.....|..  :...||.:...  ||...||........  .|||:......:|..|
  Fly   130 EGPRSSNSSAAKFGPVR--NESNYRQQRSA--PYSKGPPNNESSNQG--QGFRNKFAGGGKFGGS 188

  Fly   247 RDLYERRYQTSR--MRDFPPPPISRREPMPLPPT------LSGSLRSCSVSRGYDTMFSRRS--- 300
            .. .|.|:.::|  .||...|...||.....|.:      .:...:..|.|.|.....::|:
  Fly   189 AG-NEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQRAGGG 252

  Fly   301 -PPPPRSSNGMSRYGSPTPHGYEDFSRDAFDERMISS--RGMRGPSPPGRR 348
             |.|.........:..|..|..:......|....::|  ||..|.:|||.|
  Fly   253 GPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGR 303

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	28/64 (44%)
		hnRNP-R-Q	<88..>258	CDD:273732	56/199 (28%)
CG7903	NP_651755.2	RRM	<4..168	CDD:223796	51/168 (30%)
CG7903	NP_651755.2	RRM_SF	6..70	CDD:302621	28/64 (44%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45447422
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1563362at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.850