Protein Alignment lark and Rbp1

DIOPT Version :9

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_731510.1
• Gene: Rbp1 / 41294
• FlyBaseID: FBgn0260944
• Length: 144
• Species: Drosophila melanogaster
• Alignment Length: 144
• Identity: 36/144 - (25%)
• Similarity: 56/144 - (38%)
• Gaps: 28/144 - (19%)

  Fly    87 KIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN---YGFVHLDCVGDVQDAIKELNGRVVDGQP 148
            |::||||.......|:...|.|||.:....:.||   :.||..:...|.:||.:.|:|....|..
  Fly    12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTR 76

  Fly   149 LKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGR-------EPPSPLSAGGYR 206
            ::|::|:.|.|.:          |.|..|.        .|.:|.||       ...|..::..|.
  Fly    77 IRVEMSSGRSRDR----------RRGEGGS--------SGRSGSGRYRITPSARTTSTATSSFYN 123

  Fly   207 DRMYGRDPYPPPPP 220
            .....:.|...|.|
  Fly   124 INNLQQQPSSQPQP 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	20/67 (30%)
		hnRNP-R-Q	<88..>258	CDD:273732	35/143 (24%)
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	21/68 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23147
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010