Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005172323.1 | Gene: | rbm4.3 / 406277 | ZFINID: | ZDB-GENE-040426-1938 | Length: | 362 | Species: | Danio rerio |
Alignment Length: | 397 | Identity: | 134/397 - (33%) |
---|---|---|---|
Similarity: | 178/397 - (44%) | Gaps: | 114/397 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKV 72
Fly 73 EAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIK 137
Fly 138 ELNGRVVDGQPLKVQVSTSRVR-PKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPPSPLS 201
Fly 202 AGGYRDRMYGRDPYPPPPPPPPFLR-----DRIMDGF---RD-YDYYDR--------RFEDSR-- 247
Fly 248 -----------------------DLYERRYQTSRMRDFPPPPIS---------RREPMPLPPTLS 280
Fly 281 GSLRSCSVSRGYDTMFSRRSPPPPRSSNGMSR---YGSPTPHGYEDFSRDAFDERMISSRGMRGP 342
Fly 343 SPPGRRY 349 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 29/64 (45%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 25/64 (39%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 66/212 (31%) | ||
rbm4.3 | XP_005172323.1 | RRM_SF | 23..89 | CDD:302621 | 29/64 (45%) |
RRM_SF | 100..164 | CDD:302621 | 25/64 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0109 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 204 | 1.000 | Inparanoid score | I3706 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002310 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR23147 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1736 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.930 |