Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_991236.1 | Gene: | srsf7a / 402972 | ZFINID: | ZDB-GENE-040426-1798 | Length: | 258 | Species: | Danio rerio |
Alignment Length: | 290 | Identity: | 78/290 - (26%) |
---|---|---|---|
Similarity: | 113/290 - (38%) | Gaps: | 61/290 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 SRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN---YGFVHLDCVGDVQDAIKE 138
Fly 139 LNGRVVDGQPLKVQVST-----SRV-RPKPGMGDP-EQCYRCGRSGHWSKECPRLYGSAGGGREP 196
Fly 197 PSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLYERRYQT---SR 258
Fly 259 MRDFPPPPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPPRSSNGMSRYGSPTPHGYED 323
Fly 324 FSRDAFDERMIS------SRG---MRGPSP 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 19/67 (28%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 46/182 (25%) | ||
srsf7a | NP_991236.1 | RRM_SRSF3_like | 15..87 | CDD:240819 | 21/71 (30%) |
zf-CCHC | 108..121 | CDD:278525 | 6/12 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |