DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment lark and rbm14b

DIOPT Version :9

Sequence 1:	NP_523957.1	Gene:	lark / 38811	FlyBaseID:	FBgn0011640	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	XP_021333123.1	Gene:	rbm14b / 402858	ZFINID:	ZDB-GENE-040426-2455	Length:	560	Species:	Danio rerio

Alignment Length:	184	Identity:	73/184 - (39%)
Similarity:	105/184 - (57%)	Gaps:	14/184 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 TFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAI 70
            |.|||:|||...|...||.|:||.||.||.|.|::.:.|||::.|.....||:.|||.......:
Zfish     6 TVKLFVGNLALDTTQEELSAIFESYGQVVSCSVLRQFAFVHLQGEGAAERAIRELNGREFKGRNL 70

  Fly    71 KVEAAKSRRAPNTP--TTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQ 133
            .||.::.|     |  :||:|||||:......:::||||.:|.|:|||.|:.|.|||::...|..
Zfish    71 VVEESRGR-----PLHSTKVFVGNLSSMCTTEDLQELFQTFGKVLECDKVKGYAFVHMENKEDAL 130

  Fly   134 DAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPE---QCYRCGRSGHWSKECP 184
            .||:.|:|....|:||.|::|    :.:|....|.   .|..||:.||::.|||
Zfish   131 QAIEALHGTSFKGRPLSVELS----KVQPSKQTPTGKIPCVSCGKQGHYAGECP 180

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	27/64 (42%)
		RRM1_2_CoAA_like	87..152	CDD:409779	28/64 (44%)
		hnRNP-R-Q	<88..>258	CDD:273732	39/100 (39%)
rbm14b	XP_021333123.1	RRM1_CoAA	7..75	CDD:241052	29/67 (43%)
		RRM1_2_CoAA_like	84..149	CDD:240789	28/64 (44%)
		AIR1	<150..>187	CDD:331526	11/35 (31%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1563362at2759
OrthoFinder	1	1.000	-	-		FOG0002310
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1736
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.920