Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_989050.1 | Gene: | rbm14 / 394647 | XenbaseID: | XB-GENE-491627 | Length: | 468 | Species: | Xenopus tropicalis |
Alignment Length: | 381 | Identity: | 117/381 - (30%) |
---|---|---|---|
Similarity: | 168/381 - (44%) | Gaps: | 80/381 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKV 72
Fly 73 EAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIK 137
Fly 138 ELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPPSPLSA 202
Fly 203 GGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRF-EDSR-DLYERRYQTSRMRDFPPP 265
Fly 266 PISR-REPMPLP-------PTLSGSLRS-----CSVSRGYD-------TMFSRRSPPPPRSSNGM 310
Fly 311 -------SRYG-------SPTPHGYEDFSRDAFDERMISSRGMRGPSPPGRRYAPY 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 29/64 (45%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 28/64 (44%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 53/171 (31%) | ||
rbm14 | NP_989050.1 | RRM1_CoAA | 8..76 | CDD:241052 | 31/66 (47%) |
RRM2_CoAA | 84..151 | CDD:241053 | 29/66 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23147 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.110 |