Protein Alignment lark and rnps1

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_956055.3
• Gene: rnps1 / 327020
• ZFINID: ZDB-GENE-030131-5228
• Length: 283
• Species: Danio rerio
• Alignment Length: 198
• Identity: 49/198 - (24%)
• Similarity: 74/198 - (37%)
• Gaps: 60/198 - (30%)

  Fly    73 EAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECD---------IVRNYGFVHLDC 128
            |..:.||:|:...||:::|.||.......::|:|..||.:...|         :.:.|.:|..:.
Zfish   124 EKERKRRSPSPKPTKLYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHPNVSKGYAYVEYES 188

  Fly   129 VGDVQDAIKELNGRVVDGQPL-KVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGG 192
            ..|.|.|:|.::|..:|||.: ...:...|:||.|....|                ||
Zfish   189 PEDAQKALKHMDGGQIDGQEITATAILAQRIRPAPRRLSP----------------PR------- 230

  Fly   193 GREPPSPLSAGGYRDRMYGRDPYPPPPP----PPPFLRDRIMDGFRDYDYYDRRFEDSRDLYERR 253
                           ||      |||||    .||.:|.|.....|....  ||...||....||
Zfish   231 ---------------RM------PPPPPMWRRTPPRMRRRSRSPRRRSPV--RRRSRSRSPGRRR 272

  Fly   254 YQT 256
            :::
Zfish   273 HRS 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	49/198 (25%)
		RRM1_2_CoAA_like	87..152	CDD:409779	19/74 (26%)
		hnRNP-R-Q	<88..>258	CDD:273732	43/183 (23%)
rnps1	NP_956055.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..141		6/16 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	217..283		25/105 (24%)