Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001108616.1 | Gene: | rbm14a / 323721 | ZFINID: | ZDB-GENE-050522-496 | Length: | 471 | Species: | Danio rerio |
Alignment Length: | 401 | Identity: | 109/401 - (27%) |
---|---|---|---|
Similarity: | 166/401 - (41%) | Gaps: | 115/401 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPGAGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTL 65
Fly 66 NEFAIKVEAAKSRRAPNTP--TTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVR-------NY 121
Fly 122 GFVHLDCVGDVQDAIKELNGRVVDGQPL-----KVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSK 181
Fly 182 ECPRLYGSAGGGREPP-------------SPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGF 233
Fly 234 RDYDYYDRRFEDSRDLYERRYQTSRMRDFPPPPISRREPMPLPPTLSGSLRS------------- 285
Fly 286 -CSVSRGYDTMFSRRSPPPPRSSNGMSRYGS-PTPHGYEDFSRDAF--------DERMISSRGMR 340
Fly 341 GPSPPGRRYAP 351 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 25/64 (39%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 26/76 (34%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 49/194 (25%) | ||
rbm14a | NP_001108616.1 | RRM_SF | 7..75 | CDD:302621 | 27/67 (40%) |
RRM_SF | 84..156 | CDD:302621 | 25/71 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002310 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.880 |