Protein Alignment lark and rbm14a

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001108616.1
• Gene: rbm14a / 323721
• ZFINID: ZDB-GENE-050522-496
• Length: 471
• Species: Danio rerio
• Alignment Length: 401
• Identity: 109/401 - (27%)
• Similarity: 166/401 - (41%)
• Gaps: 115/401 - (28%)

  Fly     1 MPGAGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTL 65
            |..:...|||:||||.:|...:|.|||..:|.||...|::.:.|||::.|.....||::|||...
Zfish     1 MDDSSAVKLFVGNLDLETTQDDLIALFAPFGEVVHITVLRQFAFVHLQGEGAADSAIRDLNGREY 65

  Fly    66 NEFAIKVEAAKSRRAPNTP--TTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVR-------NY 121
            ...::.||.:|.|     |  :||:|||||.......::.:||..||.|::||.|:       .|
Zfish    66 RGRSLVVEESKGR-----PLNSTKVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPSSLTGY 125

  Fly   122 GFVHLDCVGDVQDAIKELNGRVVDGQPL-----KVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSK 181
            .||:::...|.:.||:.|:|....|:||     |||.||::|          .|..||..||::.
Zfish   126 AFVYMEHKEDAEQAIEGLHGTTFMGRPLAVELSKVQQSTNKV----------PCASCGAHGHFAG 180

  Fly   182 ECPRLYGSAGGGREPP-------------SPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGF 233
            |||.        ..||             :..:|.|.                |..::..:.:.|
Zfish   181 ECPI--------NRPPMEHHQSQAAVLAAAAAAAAGL----------------PLQVQQSVHNSF 221

  Fly   234 RDYDYYDRRFEDSRDLYERRYQTSRMRDFPPPPISRREPMPLPPTLSGSLRS------------- 285
            .:....|..|...:||     .|||:           :..|:...:.|:|.|
Zfish   222 YNTASSDPTFAALKDL-----TTSRV-----------DGKPVSSMVYGALASQVYSSVADQVIGS 270

  Fly   286 -CSVSRGYDTMFSRRSPPPPRSSNGMSRYGS-PTPHGYEDFSRDAF--------DERMISSRGMR 340
             ...:.||.|  ...:||      |:: ||: |.||...:.:|..|        .|:...::..|
Zfish   271 TSQTAEGYPT--EAEAPP------GVA-YGTEPDPHTLFEAARARFFEQGQQVLAEQQAVTKSDR 326

  Fly   341 GPSPPGRRYAP 351
            ..||. ||.||
Zfish   327 DRSPI-RRTAP 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	25/64 (39%)
		RRM1_2_CoAA_like	87..152	CDD:409779	26/76 (34%)
		hnRNP-R-Q	<88..>258	CDD:273732	49/194 (25%)
rbm14a	NP_001108616.1	RRM_SF	7..75	CDD:473069	27/67 (40%)
		RRM_SF	84..156	CDD:473069	25/71 (35%)