Protein Alignment lark and Rbm34

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001014037.1
• Gene: Rbm34 / 307956
• RGDID: 1310161
• Length: 428
• Species: Rattus norvegicus
• Alignment Length: 213
• Identity: 52/213 - (24%)
• Similarity: 89/213 - (41%)
• Gaps: 52/213 - (24%)

  Fly     9 LFIGNLDEKTQATELRALFEKYGTV----------VECDVVKNY---------------GFVHME 48
            :|:|||.......:|::.|::||.|          .|..:.|..               .:|..:
  Rat   185 VFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSINAYVVFK 249

  Fly    49 TEQQGRDAIQNLNGYTLNE-FAIKVE-----AAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQ 107
            .|:....|:|. ||..:.| |.|:|:     |::.:|:       :|||||..:.....:.|.|.
  Rat   250 EERAAAKALQR-NGAQIAEGFRIRVDLASETASRDKRS-------VFVGNLPYRVDESALEEHFL 306

  Fly   108 KYGTVVECDIVRN--------YGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGM 164
            ..|::|...||||        :|:|..:....|..|:| ||...:.|:.|:|..|.::.:.|...
  Rat   307 DCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALK-LNNSELMGRKLRVMRSVNKEKLKQQN 370

  Fly   165 GDPEQCYRCGRSGHWSKE 182
            .:|.    ..:.|..||:
  Rat   371 SNPS----VKKDGSKSKQ 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/89 (22%)
		RRM1_2_CoAA_like	87..152	CDD:409779	22/72 (31%)
		hnRNP-R-Q	<88..>258	CDD:273732	29/103 (28%)
Rbm34	NP_001014037.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..106
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	127..152
		RRM1_RBM34	183..274	CDD:409828	20/89 (22%)
		RRM2_RBM34	286..358	CDD:409829	22/79 (28%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	361..428		5/28 (18%)