Protein Alignment lark and Srsf9

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001009255.1
• Gene: Srsf9 / 288701
• RGDID: 1309495
• Length: 221
• Species: Rattus norvegicus
• Alignment Length: 211
• Identity: 54/211 - (25%)
• Similarity: 93/211 - (44%)
• Gaps: 32/211 - (15%)

  Fly     3 GAGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYG-----FVHMETEQQGRDAIQNLNG 62
            |.|..::::|||....:..:|..||.|||.:.|.::...:|     ||..|..:...|||...||
  Rat    10 GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74

  Fly    63 YTLNEFAIKVEAAKS--------RRAPNTPTT-----KIFVGNLTDKTRAPEVRELFQKYGTVVE 114
            |...:..::||..::        |.:.|.|.|     ::.|..|.......::::..::.|.|..
  Rat    75 YDYGQCRLRVEFPRAYGGRGGWPRASRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCY 139

  Fly   115 CDIVRN-YGFVHLDCVGDVQDAIKELNG---RVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGR 175
            .|:.:: .|.|......|::.|:::|:.   |..:|:       ||.:|..|..|....|.| .|
  Rat   140 ADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGE-------TSYIRVYPERGTSYGCSR-SR 196

  Fly   176 SGHWSKECPRLYGSAG 191
            ||...::.|  |.|.|
  Rat   197 SGSRGRDSP--YQSRG 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/69 (29%)
		RRM1_2_CoAA_like	87..152	CDD:409779	12/68 (18%)
		hnRNP-R-Q	<88..>258	CDD:273732	26/108 (24%)
Srsf9	NP_001009255.1	RRM1_SRSF9	15..86	CDD:241042	21/70 (30%)
		RRM2_SRSF9	103..186	CDD:410161	18/89 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..221		10/27 (37%)
		Interaction with SAFB1. /evidence=ECO:0000250	188..200		5/12 (42%)