Protein Alignment lark and Rbm14

DIOPT Version :9

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_596879.1
• Gene: Rbm14 / 170900
• RGDID: 620542
• Length: 669
• Species: Rattus norvegicus
• Alignment Length: 392
• Identity: 112/392 - (28%)
• Similarity: 161/392 - (41%)
• Gaps: 112/392 - (28%)

  Fly     8 KLFIGNLD-EKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNE-FAI 70
            |:|:||:| ..|...||.|||..||||:.|.|:|.:.||||........||:.|:|:.|.. .|:
  Rat     2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRAL 66

  Fly    71 KVEAAKSRRAPNTP--TTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQ 133
            .||.::.|     |  |.||||||::....:.|:|.||::.|.|:|||:|::|.|||::...|.:
  Rat    67 VVEMSRPR-----PLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAK 126

  Fly   134 DAIKELNGRVVDGQPLKVQVSTSRVR-------------PKPGMGDPEQCYRCGRSGHWSKECPR 185
            .||.:|||:.|.|:.:.|::||...:             .|||.||.......|.|..:.
  Rat   127 AAIAQLNGKEVKGKRINVELSTKGQKKGPALAIQSGDKTKKPGAGDTAFPGTGGFSATFD----- 186

  Fly   186 LYGSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLY 250
             |..|.|.       |.||:       |.....|.||.|.|||
  Rat   187 -YQQAFGN-------STGGF-------DGQARQPTPPFFGRDR---------------------- 214

  Fly   251 ERRYQTSRMRDFPP-----------PPISRREPMPLPPTLSGSLR---SCSVSRGYDTM------ 295
                  |.:|..||           |...|.:|   ..:|..:.|   |.|:..||.|.
  Rat   215 ------SPLRRSPPRASYVAPLTAQPATYRAQP---SVSLGAAYRAQPSASLGVGYRTQPMTAQA 270

  Fly   296 FSRRSPP------PPR-----------SSNGMSRYG--SPTPHGYEDFSRDAFDERMISSRGMRG 341
            .|.|:.|      |.|           :::.:..||  .|:......:...|.....::|.|.:|
  Rat   271 ASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGVQPSASALSTYGGQAAAASSLNSYGAQG 335

  Fly   342 PS 343
            .|
  Rat   336 SS 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	28/66 (42%)
		RRM1_2_CoAA_like	87..152	CDD:409779	28/64 (44%)
		hnRNP-R-Q	<88..>258	CDD:273732	51/182 (28%)
Rbm14	NP_596879.1	RRM1_CoAA	1..71	CDD:410020	30/68 (44%)
		PABP-1234	<3..280	CDD:130689	101/332 (30%)
		RRM2_CoAA	79..146	CDD:410021	29/66 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0109
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1563362at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920