Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006502856.1 | Gene: | Elavl4 / 15572 | MGIID: | 107427 | Length: | 397 | Species: | Mus musculus |
Alignment Length: | 256 | Identity: | 68/256 - (26%) |
---|---|---|---|
Similarity: | 100/256 - (39%) | Gaps: | 54/256 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 GAGT----FKLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRD 55
Fly 56 AIQNLNGYTLNEFAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV-- 118
Fly 119 ------RNYGFVHLDCVGDVQDAIKELNGRVVDG--QPLKVQVSTSRVRPKPGMGDPEQCYRCGR 175
Fly 176 SGHWSKECPRLYGSAGGGREPPSPLSAGGYRDRM-------YG-----RDPYPPPPPPPPF 224 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 21/72 (29%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 20/74 (27%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 41/159 (26%) | ||
Elavl4 | XP_006502856.1 | ELAV_HUD_SF | 60..396 | CDD:273741 | 65/251 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |