Protein Alignment lark and Elavl1

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_034615.2
• Gene: Elavl1 / 15568
• MGIID: 1100851
• Length: 326
• Species: Mus musculus
• Alignment Length: 173
• Identity: 41/173 - (23%)
• Similarity: 74/173 - (42%)
• Gaps: 25/173 - (14%)

  Fly     5 GTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNLN 61
            |...|.:..|.:.....|||:||...|.|....::::        ||||:..|.:....||..||
Mouse    18 GRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLN 82

  Fly    62 GYTLNEFAIKVEAAKSRRAPNTPTTK---IFVGNLTDKTRAPEVRELFQKYGTVVECDIV----- 118
            |..|....|||..|:    |::...|   :::..|.......:|.::|.::|.::...::
Mouse    83 GLRLQSKTIKVSYAR----PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTT 143

  Fly   119 ---RNYGFVHLDCVGDVQDAIKELNGRVVDG--QPLKVQVSTS 156
               |...|:..|...:.::||...||....|  :|:.|:.:.:
Mouse   144 GLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAAN 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	22/72 (31%)
		RRM1_2_CoAA_like	87..152	CDD:409779	14/77 (18%)
		hnRNP-R-Q	<88..>258	CDD:273732	14/79 (18%)
Elavl1	NP_034615.2	ELAV_HUD_SF	19..326	CDD:273741	40/172 (23%)