Protein Alignment lark and PABPC4L

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: XP_047305556.1
• Gene: PABPC4L / 132430
• HGNCID: 31955
• Length: 430
• Species: Homo sapiens
• Alignment Length: 175
• Identity: 43/175 - (24%)
• Similarity: 79/175 - (45%)
• Gaps: 20/175 - (11%)

  Fly     4 AGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVV------KNYGFVHMETEQQGRDAIQNLNG 62
            :|...:||.|||:......|...|..:|.::...|:      |.|.|||.:.:.....||:.:||
Human   153 SGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNG 217

  Fly    63 YTLNEFAIKVEAAKSR-------RAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV-- 118
            ..|....:.|...|:|       |:..:..|.:::.|.........::::|.|||..:...::
Human   218 KLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD 282

  Fly   119 -----RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRV 158
                 :.:|||..|.....:.|::|:|||.::||.:.|..:..:|
Human   283 SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	19/70 (27%)
		RRM1_2_CoAA_like	87..152	CDD:409779	16/71 (23%)
		hnRNP-R-Q	<88..>258	CDD:273732	18/78 (23%)
PABPC4L	XP_047305556.1	PABP-1234	68..>381	CDD:130689	43/175 (25%)