DRSC/TRiP Functional Genomics Resources

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Protein Alignment lark and LOC1276190

DIOPT Version :10

Sequence 1:NP_523957.1 Gene:lark / 38811 FlyBaseID:FBgn0011640 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_061508358.1 Gene:LOC1276190 / 1276190 VectorBaseID:AGAMI1_007483 Length:186 Species:Anopheles gambiae


Alignment Length:68 Identity:23/68 - (33%)
Similarity:32/68 - (47%) Gaps:11/68 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PGAGTF---KLFIGNLDEKTQATELRALFEKYGTVVECDVV-------KNYGFVHMETEQQGRDA 56
            |..||.   ::|:|.:...|...||..||..||.|....::       |.||||..|||.:.: .
Mosquito    18 PKYGTLIPNRVFVGGISGDTTEAELCRLFSSYGNVKSTKIIVDRAGVSKGYGFVTFETEHEAQ-K 81

  Fly    57 IQN 59
            :||
Mosquito    82 LQN 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
larkNP_523957.1 RRM1_2_CoAA_like 8..73 CDD:409779 20/59 (34%)
RRM1_2_CoAA_like 87..152 CDD:409779
hnRNP-R-Q <88..>258 CDD:273732
LOC1276190XP_061508358.1 None
Blue background indicates that the domain is not in the aligned region.

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