Protein Alignment lark and Rox8

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: XP_312633.5
• Gene: Rox8 / 1273632
• VectorBaseID: AGAMI1_005831
• Length: 458
• Species: Anopheles gambiae
• Alignment Length: 262
• Identity: 62/262 - (23%)
• Similarity: 110/262 - (41%)
• Gaps: 55/262 - (20%)

  Fly     9 LFIGNLDEKTQATE--LRALFEKYGTVVECDVVKN-----YGFVHMETEQQGRDAIQNLNGYTLN 66
            |::||||  |..||  |..||.:.|||..|.:::.     :.|:.....|..:.|:..:|.....
Mosquito    10 LYVGNLD--TSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNKRMFL 72

  Fly    67 EFAIKVE-AAKSRRAPNTPTTK---IFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN------- 120
            :..|:|. |..:...|.|.|::   ||||:|:.:.....:||.|..:|.:..|.|||:
Mosquito    73 KKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSR 137

  Fly   121 -YGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECP 184
             |.||......:.::||..:||:.:..:.::...||   |..|...:..:..:.|::..:.:
Mosquito   138 GYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWST---RKPPAPRENSKGIKSGKTPGFEE--- 196

  Fly   185 RLYGSAGGGREPPSPLS----AGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYD--RRF 243
             :|.:.       ||.:    .||:              ||.....:.|...|..:.:.:  |.|
Mosquito   197 -IYNNT-------SPTNTTVYCGGF--------------PPNAITDELIQKHFAQFGHINDTRVF 239

  Fly   244 ED 245
            :|
Mosquito   240 KD 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/70 (29%)
		RRM1_2_CoAA_like	87..152	CDD:409779	20/75 (27%)
		hnRNP-R-Q	<88..>258	CDD:273732	37/172 (22%)
Rox8	XP_312633.5	PABP-1234	9..>269	CDD:130689	62/262 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	20/73 (27%)