Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_006319.1 | Gene: | RBM14 / 10432 | HGNCID: | 14219 | Length: | 669 | Species: | Homo sapiens |
Alignment Length: | 392 | Identity: | 112/392 - (28%) |
---|---|---|---|
Similarity: | 161/392 - (41%) | Gaps: | 112/392 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 KLFIGNLD-EKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNE-FAI 70
Fly 71 KVEAAKSRRAPNTP--TTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQ 133
Fly 134 DAIKELNGRVVDGQPLKVQVSTSRVR-------------PKPGMGDPEQCYRCGRSGHWSKECPR 185
Fly 186 LYGSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLY 250
Fly 251 ERRYQTSRMRDFPP-----------PPISRREPMPLPPTLSGSLR---SCSVSRGYDTM------ 295
Fly 296 FSRRSPP------PPR-----------SSNGMSRYG--SPTPHGYEDFSRDAFDERMISSRGMRG 341
Fly 342 PS 343 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 28/66 (42%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 28/64 (44%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 51/182 (28%) | ||
RBM14 | NP_006319.1 | RRM1_CoAA | 1..71 | CDD:241052 | 30/68 (44%) |
PABP-1234 | <3..280 | CDD:130689 | 101/332 (30%) | ||
RRM2_CoAA | 79..146 | CDD:241053 | 29/66 (44%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 147..175 | 7/27 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 193..232 | 15/80 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 284..303 | 2/18 (11%) | |||
TRBP-interacting domain, interaction with STIL. /evidence=ECO:0000269|PubMed:25385835 | 307..354 | 6/31 (19%) | |||
PRK13875 | <319..433 | CDD:237537 | 5/19 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 566..590 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0109 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23147 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.880 |