DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrva and SIT1

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:468 Identity:84/468 - (17%)
Similarity:151/468 - (32%) Gaps:160/468 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 MALVFMCLLGFGSYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWPNVVLCFVGGFLIDRLFG 117
            :||.|...|   ..:.|...|.::..|:       |..|..||.:|..:.|.|            
Yeast    71 VALFFSLFL---IAYAYGLDGNIRYTFQ-------AYATSSYSQHSLLSTVNC------------ 113

  Fly   118 IRLGTIIYMMILLVGQLIFA-CGGILDAFWMMILGRFIFGIGA--ESLAVAQNSYAV--LWFKGK 177
                  |..:|..|||:.|| ...|...|.:||:....:.:|.  ||.||....:||  .:::..
Yeast   114 ------IKTVIAAVGQIFFARLSDIFGRFSIMIVSIIFYSMGTIIESQAVNITRFAVGGCFYQLG 172

  Fly   178 ELNMVFGLQLSVARFGS---------------TVNFWVMQPIYEYVSNFYKGHTALGVVLLLATL 227
            ...::..|::..:.|.:               .:|.|:...:...:...:|  ..:|:...:..|
Yeast   173 LTGIILILEVIASDFSNLNWRLLALFIPALPFIINTWISGNVTSAIDANWK--WGIGMWAFILPL 235

  Fly   228 TCVMSMTCALILGWMDKRAERILQRNNNPAGQIPKLT-DVFSFKPPFWMVSII----------CV 281
            .|:....|.|.:.::.::..:  .|.......:.||. ..|.....||.:.||          ||
Yeast   236 ACIPLGICMLHMRYLARKHAK--DRLKPEFEALNKLKWKSFCIDIAFWKLDIIGMLLITVFFGCV 298

  Fly   282 AY------------------------YVAIFP-------------------------FIALGQNF 297
            ..                        :|.:.|                         |.||...|
Yeast   299 LVPFTLAGGLKEEWKTAHIIVPEVIGWVVVLPLYMLWEIKYSRHPLTPWDLIQDRGIFFALLIAF 363

  Fly   298 FVDRFGL-----------------SPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRN-------- 337
            |:: |..                 |...|..:.||...::.:...:.|||:.|:.|.        
Yeast   364 FIN-FNWYMQGDYMYTVLVVAVHESIKSATRITSLYSFVSVIVGTILGFILIKVRRTKPFIIFGI 427

  Fly   338 VTWVFTATLTT------------IGAHALL-----TFTQLTPYVGMIIMGLSYSMLAASLWPLVA 385
            ..|:.:..|..            ||:..||     :||.:| ...:.....:::.:|.    :.:
Yeast   428 SCWIVSFGLLVHYRGDSGAHSGIIGSLCLLGFGAGSFTYVT-QASIQASAKTHARMAV----VTS 487

  Fly   386 LIIPEYQLGTAYG 398
            |.:..|.:|:|:|
Yeast   488 LYLATYNIGSAFG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 83/466 (18%)
MFS_1 58..410 CDD:284993 81/463 (17%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 84/468 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341799
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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