DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mrva and ARN1

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:584 Identity:92/584 - (15%)
Similarity:175/584 - (29%) Gaps:230/584 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YDAPGALQNY--FKKDLNLTSAQFTLIYSIYS-WPNVVLCFVGGFLIDRLFGIRLGTIIYM---- 126
            |..|...:.|  .:::.:|...|..:|.|.|: |....:..:..|:....:|:. |.|.|:    
Yeast    38 YGLPQLSEKYNALRQNRSLIIQQTEIIGSAYNKWYLQAILLLSAFICGYGYGLD-GNIRYIYTGY 101

  Fly   127 ------------MILLVGQLIFACGGILDAFWMMILGR----------FIFGIGAESLAVAQNSY 169
                        .|.::..::.|...|:.|....:.||          ::.|...:|.|.....|
Yeast   102 ATSSYSEHSLLSTINVINAVVSAASQIIYARLSDVFGRLYLFISAVILYVVGTIIQSQAYDVQRY 166

  Fly   170 A--VLWFKGKELNMVFGLQLSVARFGS---------------TVNFWVMQPIYEYVSNFYKGHTA 217
            |  .:::....:.::..|.:.::.|.|               .:|.|:...|....:........
Yeast   167 AAGAIFYNAGYVGVILILLIILSDFSSLKWRLLYQFVPTWPFIINTWIAGNITSRANPVVNWSWD 231

  Fly   218 LGVVLLLATLTCVMSMTCALILGWMDKRA---------ERILQRNNNPAGQIPKLTDVFSFKPPF 273
            :|:...:..|:||..:.|.|.:.|..::.         :...|.:    |.|..|      |..|
Yeast   232 VGMWAFIFPLSCVPIVLCMLHMQWRARKTPEWHALKGQKSYYQEH----GFIKIL------KQLF 286

  Fly   274 WMVSII----------CVAYYVA--------------IFPFI----------------------- 291
            ||:.::          |:...:.              |.||:                       
Yeast   287 WMLDVVGVLLMGCSLGCILVPLTLAGGVKTTWNDSRLIGPFVLGFVLIPILWIWEYRFARDPILP 351

  Fly   292 -----------ALGQNFFVDRFGLSPAE----------------ANTVDSLVYLIAAVSSPVFGF 329
                       ::|.:|.:|......|:                |..:.:|...::.|:||.|..
Yeast   352 YRLVKDRAVWSSMGISFLIDFIYYMAADYLYTVMIVAVNESVKSATRIATLSSFVSTVASPFFAL 416

  Fly   330 IIDKLGRNVTWVFTATLTTIGAHALLTFTQLTPYV------GMIIMGLSYSMLAAS--------- 379
            ::.:.                       |:|.|::      .|:.|||.|.....|         
Yeast   417 LVTRC-----------------------TRLKPFIMFGCALWMVAMGLLYHFRGGSQSHSGIIGA 458

  Fly   380 --LW---------PLVALI---IPEYQLGTAYGFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQ 430
              :|         |:...:   :....:.|......::..:|.||.:.|:|.|         |.|
Yeast   459 LCVWGVGTTLFTYPVTVSVQSAVSHENMATVTALNYTLYRIGSAVGSAVSGAI---------WTQ 514

  Fly   431 LFF------MGWLTIALISTG----------VIWAYNNKNRGNLNMTPQQRAQFVSAENYQNFE 478
            ..:      ||  .:||.:|.          ..|.           |||:.|...:.:..|..|
Yeast   515 TLYKQILKRMG--DVALATTAYESPYTFIETYTWG-----------TPQRNALMNAYKYVQRLE 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 85/552 (15%)
MFS_1 58..410 CDD:284993 73/498 (15%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 83/548 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341800
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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