DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrva and GEX2

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_013032.1 Gene:GEX2 / 853981 SGDID:S000001814 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:490 Identity:89/490 - (18%)
Similarity:165/490 - (33%) Gaps:165/490 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 MALVFMCLLGFG---------SYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWPNVVLCFVG 108
            ::..|:|  |||         :|..|    |..:|.:..|..|......:.|:.|  .||...:.
Yeast    63 ISTAFVC--GFGISLDYTLRSTYTGY----ATNSYSEHSLLSTVQVINAVVSVGS--QVVYSRLS 119

  Fly   109 G-------FLIDRLFGIRLGTIIY-----MMILLVGQLIFACGGI-------------------- 141
            .       ||:..:|.| :||||.     :.:...|.:.:.||.:                    
Yeast   120 DHFGRLRLFLVATIFYI-MGTIIQSQATRLTMYAAGSVFYNCGYVGTNLLLTLILSDFSSLKWRM 183

  Fly   142 ---LDAFWMMILGRFIFGIGAESLAVAQN-----SYAV-LW---FKGKELNMVFGLQLSVARFGS 194
               ..::|..|:..:|.|    ::..|.|     |:.: :|   :....|.::|.:.....:...
Yeast   184 FYQYASYWPYIIIPWISG----NIITAANPQKNWSWNIAMWAFIYPLSTLPIIFLILYMKYKSSK 244

  Fly   195 TVNFWVMQP---------IYEYVSNFYKGHTALGVVLLLATLTCVM-SMTCA------------- 236
            |..:..::.         ::|.:...:.....:|::|:..:|.|:: .:|.|             
Yeast   245 TAEWRSLKEQARKERTGGLFENLVFLFWKLDIVGILLITVSLGCILVPLTLANETSQKWHNSKII 309

  Fly   237 -----------LILGWMDKRAERILQRNNNPAGQIPKLTDVFSFKPPFWMVSI--ICVAYYVAIF 288
                       :.|.|..|.|:.            |.|        ||.::|.  |.....|..|
Yeast   310 ATLVSGGCLFFIFLYWEAKFAKS------------PLL--------PFKLLSDRGIWAPLGVTFF 354

  Fly   289 PFIALGQNFFVDRFGLSPA------EANT----VDSLVYLIAAVSSPVFGFIIDK--------LG 335
            .|.    .||:....|.|.      |::|    :.:|...:||.:||.:..::.|        :|
Yeast   355 NFF----TFFISCDYLYPVLLVSMKESSTSAARIVNLPDFVAATASPFYSLLVAKTRKLKLSVIG 415

  Fly   336 RNVTW-----VFTATLTTIGAHALLTFTQLTPYVGMIIMGLSYSMLAASLWPLVALIIPEYQLGT 395
            ....|     :|.......|:|..:       ....:|||||..:.:.|:..::..:....::..
Yeast   416 GCAAWMVCMGLFYKYRGGSGSHEGV-------IAASVIMGLSGLLCSNSVIVILQAMTTHSRMAV 473

  Fly   396 AYGFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQ 430
            ..|...:...||.|:...|:|.|         |.|
Yeast   474 ITGIQYTFSKLGAAIGASVSGAI---------WTQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 89/488 (18%)
MFS_1 58..410 CDD:284993 82/463 (18%)
GEX2NP_013032.1 MFS_ARN_like 59..571 CDD:340880 89/490 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341798
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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