DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrva and VBA3

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:425 Identity:78/425 - (18%)
Similarity:136/425 - (32%) Gaps:146/425 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 MMILLVGQLIFACGGILDAFWMMILGRFIFGIGAESLAVA--QNSYAVLWFKGKELNMVFGLQLS 188
            |.:|:||:::.:.||........::|..:.|..:..|.::  ..::||....|..:...|     
Yeast     1 MNMLIVGRVVASVGGSGLQTLCFVIGCTMVGERSRPLVISILSCAFAVAAIVGPIIGGAF----- 60

  Fly   189 VARFGSTVN------FWVMQPIYEYVSNFYKGHTALGVVLLLATLTCVMSMTCALILGWMDKRAE 247
                  |.:      |::..||           ..|.:::.|.|.                 :||
Yeast    61 ------TTHVTWRWCFYINLPI-----------GGLAIIMFLLTY-----------------KAE 91

  Fly   248 R--ILQRNNNPAGQIPKLT---------------------DVFSFKPPFWMVSIICVAYYVAIFP 289
            .  |||:..:..|.|...|                     |.|.|        .:|.|..|....
Yeast    92 NKGILQQIKDAIGTISSFTFSKFRHQVNFKRLMNGIIFKFDFFGF--------ALCSAGLVLFLL 148

  Fly   290 FIALGQNFFVDRFGLSPAEANTVDSLVYLIAAVSSPVFG-----FIIDKLG---RNVTW------ 340
            .:..|.|.:         ..|:...:.||:..|...:|.     |:.||..   .|:::      
Yeast   149 GLTFGGNKY---------SWNSGQVIAYLVLGVLLFIFSLVYDFFLFDKFNPEPDNISYRPLLLR 204

  Fly   341 --VFTATLTTIGAHALLTFTQLTPYVGMIIMGLSYSML--AASLWP----LVALIIPEYQLGTAY 397
              |....:..|.   ::||...|.|.|.:|..:.:..|  |:|.|.    |:.::|.......|.
Yeast   205 RLVAKPAIIIIN---MVTFLLCTGYNGQMIYSVQFFQLIFASSAWKAGLHLIPIVITNVIAAIAS 266

  Fly   398 GFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQL----------------FFMGW-LTIALISTG 445
            |..  .:.|||....::.|.::...|...|.|..                |.:|: |..:|:|  
Yeast   267 GVI--TKKLGLVKPLLIFGGVLGVIGAGLMTLMTNTSTKSTQIGVLLLPGFSLGFALQASLMS-- 327

  Fly   446 VIWAYNNKNRGNLNMT---PQQRAQFVSAENYQNF 477
                      ..|.:|   |:....|:....:..|
Yeast   328 ----------AQLQITKDRPEAAMDFIEVTAFNTF 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 73/391 (19%)
MFS_1 58..410 CDD:284993 64/336 (19%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 78/425 (18%)
MFS <1..>181 CDD:421695 41/235 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341823
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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