DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrva and rtet

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_524429.1 Gene:rtet / 42500 FlyBaseID:FBgn0028468 Length:477 Species:Drosophila melanogaster


Alignment Length:458 Identity:89/458 - (19%)
Similarity:165/458 - (36%) Gaps:143/458 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 FMALVFMCLLGFGSYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWPNVVLCFVGGFLIDRLF 116
            |::|:| .||.| :......|..|::|.:.|   :|..:.::.....|...:|.....: |..||
  Fly    54 FVSLLF-DLLAF-TIILPLLPSLLEHYRQND---SSGLYAVLTDRVRWFQQLLGAPDRY-ISVLF 112

  Fly   117 GIRLGTIIYMM-------------------ILL-------VGQLIFACGGILDAFWMMILGRFIF 155
            |..||::...:                   :||       :..||:||.   ..|.:.:|.||:.
  Fly   113 GGFLGSMFSFLQFVASPIVGGLSDYYGRKPVLLACASGIALSYLIWACS---SNFALFVLARFVG 174

  Fly   156 GIGAESLAVAQN---SYAVLWFKGKELNMV---FGLQLSVA------------RFGSTVNFWVMQ 202
            ||...::::..:   ..:.:..:|:.:.:|   |.|...|.            :.|||   |.:.
  Fly   175 GISKGNISLCMSVITDVSSVKTRGRGMALVGVAFSLGFIVGPMIGALFAIFSDKSGST---WFVL 236

  Fly   203 PIYEYVSNFYKGHTALGVVLLLATLTCVMSMTCALILGWMDKRAERI-------LQRNNNPA--- 257
            |      :......|:|.:::||   |.:..|..     .:||.:.|       ||..|..|   
  Fly   237 P------SLLAFGLAVGDLVVLA---CCLRETLP-----KEKRVKEISSALSYGLQLLNFSAIFR 287

  Fly   258 ----GQIPKLTDVFSFKPPFWMVSIICVAYYVAIFPFIALGQNFFV-----DRFGLSPAEANTVD 313
                ..:|| .|:.:.:.       |.:.|:  ::.|:..|..|.|     .:||.:..:    .
  Fly   288 FAAIKNVPK-KDIAALRS-------IGLVYF--LYLFLYSGLEFTVTFLMYHKFGYTSMD----Q 338

  Fly   314 SLVYLIAAVSSPVF-GFIIDKLGRNVTWVFTATLTTIGAHALLTFTQLTP--------------Y 363
            :.::|...|...:. |.::.:|..          ..|..:|:.:...:.|              |
  Fly   339 AKMFLTTGVIMTLLQGSVVRRLPE----------AKIKGYAIFSLYLIVPAFVVVGLAEGSRMLY 393

  Fly   364 VGMIIMGLSYSMLAASLWPLVALIIPEYQLGTAYGFCQSIQNLGLAV---------------ITI 413
            .||.:..:|.:.....|..||:....:.|.|:..|..:|:..|..|:               ||.
  Fly   394 AGMTLFAISTAFAVTCLTTLVSKYGNDDQKGSVLGIFRSLGALARALGPVVGCIAFWCVGSRITY 458

  Fly   414 VAG 416
            :||
  Fly   459 IAG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 88/455 (19%)
MFS_1 58..410 CDD:284993 81/429 (19%)
rtetNP_524429.1 MFS 105..466 CDD:119392 76/402 (19%)
MFS_1 108..442 CDD:284993 72/377 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440187
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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