DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrva and CG5078

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_649238.3 Gene:CG5078 / 40276 FlyBaseID:FBgn0037005 Length:447 Species:Drosophila melanogaster


Alignment Length:439 Identity:94/439 - (21%)
Similarity:159/439 - (36%) Gaps:128/439 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VSRAGRRDNELSLPSGGCCMPSSTSHRFMALVFMCLLGFGSYFCYDAPGALQNYFKKDLNLTSAQ 89
            :|:.|.:...:||.|.......|..| .:.:||:      .||.:   |.|.......|..|...
  Fly     1 MSKFGLKKLLVSLASTSGIGKPSVGH-ILVVVFL------EYFAW---GLLTMPMIATLKETFPD 55

  Fly    90 FTLIYSIYSWPNVVLCFVG--GFLIDRLFGIRLGTIIYMMILLVGQLIFACGGI----LDAFWMM 148
            .|.:.:     .:|:...|  .||...|.| .|..|....:||:..:||....|    :|.:|..
  Fly    56 HTFLMN-----GLVMGVKGILSFLSSPLIG-ALSDIYGRKVLLLITVIFTSLPIPMMTMDNWWFF 114

  Fly   149 ILGRFIFGIGAESLAVAQNSYAVLWFKGKELNMVFGLQLSVARFGSTVNFWVMQPIYEYVSNFYK 213
            ::.. |.|:...|.:||....|.:..|.:...   ..:|..|.|.:::   |:.|.   :.|...
  Fly   115 VISS-ISGVLGVSFSVAFAYVADVTTKEERSR---SYELVSATFAASL---VIAPA---MGNLIM 169

  Fly   214 GHTALGVVLLLATLTCVMSMTCALILGWMDKRAERILQRNNNPAGQIPKLTDVFSFKPPFWMVSI 278
            ....:..|:|:|||....::...|:      .....||:|....|...|..|             
  Fly   170 DRYGINTVVLVATLVSTTNVMFVLL------AVPETLQQNVRSTGLSWKQAD------------- 215

  Fly   279 ICVAYYVAIFPFIALGQNFFVDRFGLSPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFT 343
                      ||::|      .|.|..|.        |.|:..|   :|.|::.:.|.       
  Fly   216 ----------PFLSL------RRVGSDPN--------VLLLCVV---MFTFLLPEAGE------- 246

  Fly   344 ATLTTIGAHALLT----FTQLTPYVG-MIIMGLSYSMLAASLWPLVALIIPEYQLGTAYGFCQSI 403
              .:::.|:..||    ||:|:..|. |.|:|:|.::...|:                      :
  Fly   247 --YSSVPAYLKLTMGFDFTELSTLVAFMAILGISINVTLGSI----------------------V 287

  Fly   404 QNLGLAVITIVAGIIVDHSGGEHMWLQLFFMG------WL--TIALIST 444
            :.|| |...|:.|:::     |.:.|.||.:|      ||  .:|.:|:
  Fly   288 KTLG-AKNAIILGLLL-----ELLQLILFAIGYEKWQMWLAGNVAALSS 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 87/409 (21%)
MFS_1 58..410 CDD:284993 73/362 (20%)
CG5078NP_649238.3 MFS 27..375 CDD:119392 87/412 (21%)
MFS_1 27..368 CDD:284993 87/412 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440191
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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