DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mrva and mfsd-8

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_001022903.1 Gene:mfsd-8 / 190242 WormBaseID:WBGene00021814 Length:519 Species:Caenorhabditis elegans


Alignment Length:552 Identity:94/552 - (17%)
Similarity:197/552 - (35%) Gaps:153/552 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DNEEVSRPTEEDQV-------VSRAGRRDNELSLPSGGCCMPSSTS----HRFMALVFMCLLGFG 64
            :..|:.|.||:.::       :...|:.::::.:.:      ..||    :...|:...|.:.|.
 Worm     5 EENELPRSTEKAKISTISSNSIDSGGKSESDIIIDN------RETSWQSIYLLTAIGMFCGIQFS 63

  Fly    65 SYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWPNVVLCFVGGFLIDRLFGIRLGTIIYMMIL 129
            .:|    |.........|...:::.|..|.:.:|....:...|.|:.:::...:|...:..:.::
 Worm    64 IFF----PTLWPFLNTVDPTASASFFGFITAAFSVGQGLASPVFGYWMNKAKSVRQPLVFGISVM 124

  Fly   130 LVGQLIFACGGILDAF------WMMILGRFIFGIGAESLAV--------------------AQNS 168
            ::..:||.   .::||      |:|::.||..|:||.::.|                    .|.|
 Worm   125 ILSNIIFC---FVEAFAEKERRWVMMVARFFIGVGAGTIGVMRAYAATASSLKDRARAITFIQAS 186

  Fly   169 YAVLWFKGKELNMVF------GLQLSV---------ARFGSTVNFWVMQPIYEYVSNFYKG---- 214
            |.:....|..:.:.|      ||...|         |.|.|.::...:..|:.::...|.|    
 Worm   187 YVIGMTLGPGIQVAFTPIGYPGLSKGVFHVDMYTSPAWFASIISLLSVIFIFIFLEENYAGLDQG 251

  Fly   215 ------HTALGVVLLLATLTCVM----------------SMTCALILGWMDKRAER---ILQRNN 254
                  :||:.....::...||:                |:...::.||.:.:|..   |||..|
 Worm   252 ADTEDSYTAMPTFDTISVAVCVLTQFTLMFIITNLETIGSLYAKMMWGWTNAQAVEYTGILQAVN 316

  Fly   255 NPAGQI------PKLTDVFS--FKPPFWMVSI-ICVAYYVAIFPFIALGQNFFVDRFGLSPAEAN 310
            ...|.:      .||.|..|  .:..|.:..: :.|.|:|..:|: ..|.:.          :..
 Worm   317 GLVGVLVYALFAVKLGDYISQARERIFTIFGLALGVLYHVVTYPY-PWGPDL----------KYT 370

  Fly   311 TVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFTATLTTIGAH-ALLTFTQLTPYVGMIIMGLSYS 374
            |::..::                 |:|.|       ..:|.: |...:...|..|...:....|.
 Worm   371 TINVTIH-----------------GKNQT-------EDLGCNPAKYHWCTYTKDVNFWLYASMYG 411

  Fly   375 MLAASLWPLVAL--------IIPEYQLGTAYGFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQL 431
            ::.|:.:|:|.:        |:...:.||..|......:....:..::...|....|.|.:|:  
 Worm   412 IVLAACFPIVNICMNTLFSKILGARRQGTMQGVMLMAGSFARTIGPLLVSWIFQEWGPEPIWI-- 474

  Fly   432 FFMGWLTIALISTGVIWAYNNKNRGNLNMTPQ 463
              :..||:::  |.:.|....:....|:..|:
 Worm   475 --IEILTLSI--TAIFWMIFYRRMKPLDSNPK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 83/480 (17%)
MFS_1 58..410 CDD:284993 76/439 (17%)
mfsd-8NP_001022903.1 MFS_MFSD8 48..495 CDD:340884 85/494 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156829
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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