DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mrva and W03C9.6

DIOPT Version :9

Sequence 1:NP_001261505.1 Gene:mrva / 38808 FlyBaseID:FBgn0035763 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_496546.2 Gene:W03C9.6 / 189149 WormBaseID:WBGene00012222 Length:500 Species:Caenorhabditis elegans


Alignment Length:513 Identity:82/513 - (15%)
Similarity:156/513 - (30%) Gaps:200/513 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GGCCMPSSTSHRFMALVF--MC--------------LLGFGS---YFCYDAPGALQNYFKKDLNL 85
            |.....|...|...||||  .|              .:.||:   |.|.:..|:.:.|.      
 Worm    86 GNATAASKLFHAISALVFAIWCHRFQSFQIPLIAGRFIAFGACLLYLCVEMFGSGRRYV------ 144

  Fly    86 TSAQFTLIYSIYSWPNVVLCFVGGFLIDRLFGI--RLGTIIYMMILLVGQ---LIFACGGILDAF 145
                            :.||::       |||:  ...||:...:..:.:   ...|..|:..|.
 Worm   145 ----------------MALCYI-------LFGVASSSSTILRAYVAAISRHEDRPQAYSGLNAAT 186

  Fly   146 WMMILGRFIFGIGAESLAVAQNSYAVLWFKGKEL--NMVFGLQLSVARFGSTVNFWVMQPIYEYV 208
            .:.|:      :|    .:.|.:::.:.:.|.|:  |:.|.:..:.....:..||          
 Worm   187 MISII------VG----PIIQAAFSSIHYPGWEIFPNVKFHIYSAPVWVAAATNF---------- 231

  Fly   209 SNFYKGHTALGVVLLLATL--------TCVMSMTCALILGWMDKRAERILQRNNNPAGQIPKLTD 265
                     :.:.::...|        :.:......|.:..:..|.|::.|.|.|          
 Worm   232 ---------ISITIIKCCLKELPRRAKSDMKKNQSFLTIAGVKSRIEKVSQMNLN---------- 277

  Fly   266 VFSFKPPFWMVSIICVAYYVAIFPFIALGQNFFVDRFG--LSPAEANTVDSLVYLIAAVSSPVFG 328
                    |.:.::|                 ::.:..  ||.....|:.|::::..      :|
 Worm   278 --------WRIVVLC-----------------WIQKMNATLSVVTLTTLTSVIFMTN------YG 311

  Fly   329 FIIDKLGRNVTWVFTATLTTIGAHALLT-----FTQLTPY--------VGMIIMGLSYSMLAASL 380
            :    .|.......:.||..:|..|::.     |..|..:        :|::|....|  :....
 Worm   312 W----SGAKTVLAMSITLGAVGILAVIVAGLYFFCNLGNFLQQRIAFLIGLVIFMSMY--VFTYP 370

  Fly   381 WPLVALIIPEYQL-------GTAYGFCQS----IQNLGLAVITIVAGIIVDHSGGEHMWLQLFFM 434
            |..|:..:|.|..       .|.|.:|.:    ...|.|.||.:|.||.:.              
 Worm   371 WTPVSNPVPPYNALADVGCNSTTYSWCDTSYAPAAPLLLIVIAVVMGIGIP-------------- 421

  Fly   435 GWLTIALISTGVIWAYNNKNRGNLNMTPQQRAQFVSAE--------------NYQNFE 478
                   :|:..:.|..:|..|.:|.:..|.|..|:.:              .|..||
 Worm   422 -------LSSVALDAIYSKTLGPINQSVMQGAMIVAEDVILILGPIYSSGVYTYSGFE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrvaNP_001261505.1 MFS 55..448 CDD:119392 68/452 (15%)
MFS_1 58..410 CDD:284993 59/409 (14%)
W03C9.6NP_496546.2 MFS 48..489 CDD:119392 82/513 (16%)
MFS_1 52..459 CDD:284993 79/498 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156835
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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