DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rint1 and MAG2

DIOPT Version :10

Sequence 1:NP_648102.2 Gene:Rint1 / 38807 FlyBaseID:FBgn0035762 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_190354.1 Gene:MAG2 / 823924 AraportID:AT3G47700 Length:795 Species:Arabidopsis thaliana


Alignment Length:838 Identity:173/838 - (20%)
Similarity:312/838 - (37%) Gaps:210/838 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KDASQLHRASHLVSHYKKHLQVLSQTLDYEDPQNVSCYKTAFQCQQQVCESIDFELEKLAHFEDK 86
            |:::.|..::.|||..:..:..|.|.|...:.|                  ::..|...|.|.|:
plant    26 KESTDLSHSTGLVSELQTEISELDQRLAGLNRQ------------------LESGLAAYASFSDR 72

  Fly    87 -------LKRKLKEC----------------QPVLEGVA-EDL----DKVRQLQRLQQYL----- 118
                   :..||.:.                :...|.|| |||    .:|.|::.::.|.     
plant    73 VGGLFFEVNAKLADLSSSTSVTRSASDSGKEEEATEHVAGEDLPSLAKEVAQVESVRAYAETALK 137

  Fly   119 --LLVQDIQEISAALGNAINGKDEDKLVNIYLTLYEGNDCEHSVVGRLHAVQA-----QSLKSFA 176
              .||.||::   |:.:::|       .|:..:...|.:     ..||||::.     :.|.|.|
plant   138 LDTLVGDIED---AVMSSLN-------KNLRTSRSSGFE-----EVRLHAIKTLKTTEEILSSVA 187

  Fly   177 ERTAIYWHKLLL---KRLSSA-----------FEAVLKSMRW---------AHLEQQALNYSSAR 218
            :|.. .|.:|:.   .|:..|           :.|:|.|:||         |.|:.::.|..:..
plant   188 KRHP-RWARLVSAVDHRVDRALAMMRPQAIADYRALLSSLRWPPQLSTLTSASLDSKSENVQNPL 251

  Fly   219 DTAKAQLLAEYMFLIKSPAEERAPLQSITPS--------------IVCQPINRVVQLLLAPYRQR 269
            ...:..|.::|.    ........||.:...              :..||: ..::.|:.|....
plant   252 FNMEGSLKSQYC----GSFHALCSLQGLQLQRKSRQLGIHKGENVLFHQPL-WAIEELVNPLTVA 311

  Fly   270 FQFHFTGTRQTNRLDKPEWFYTQILNWGKETHFFVGKTFQPAAIKAGKLDYNLRLEFIRGLVQ-- 332
            .|.||     |...:|||:.:..:....::....:.:..||...:|....|:.|.|::..:|.  
plant   312 SQRHF-----TKWSEKPEFIFALVYKITRDYVDSMDELLQPLVDEAKLAGYSCREEWVSAMVSSL 371

  Fly   333 ---LAIEKLAVDIEQI---------AQDQILFAHLLDETLAFESELRETFGYPASFP-------- 377
               |..|...:.:.|:         ::.::.:.||:|..::|:..::..........        
plant   372 SLYLVKEIFPIYVGQLDEANETDLRSEAKVSWLHLIDLMISFDKRVQSLVSQSGILSLQEDGNLL 436

  Fly   378 --SAISVI-TQPMYLLRW--ISLEERFC--AEKMDDILQ--AETPFQLIDPNSFENDLKIPKCAD 433
              |::||. .:|.:|..|  |.|:||..  .|::|:...  |:...:||   |..|..:.|..:.
plant   437 RISSLSVFCDRPDWLDLWAEIELDERLVKFKEEIDNDRNWTAKVQDELI---SSSNVYRPPIISS 498

  Fly   434 QFMRLLDAIKDRYYGLIQPGHQLQFLHLQL-------ELIDSFRQRLVQLHSSGAVPS----IPI 487
            .|::.|.:|.:|...:  |...|:...|:|       :.:|....|........|:..    |.:
plant   499 IFLQHLSSIIERSKSV--PALYLRARFLRLAASPTIHKFLDCLLLRCQDADGLTALTENNDLIKV 561

  Fly   488 LNAIN---YLVMVLREWGENVHYLHLHAALAGP-------NATE-INSVFEHAVAELEHWARQLM 541
            .|:||   |:..||.||.|:|.:|.:......|       |.|| ...:|.....:||.:..:.:
plant   562 SNSINAGHYIESVLEEWSEDVFFLEMGTGQHDPQEVPGLENFTEPSEGIFGEEFEKLEKFRLEWI 626

  Fly   542 RNLATKATNEMKAKSMSY--RRDAWPTMPEQNSREPFILSPSGGEMFQVLVTLLHNLERELS--- 601
            ..|:........|:...|  .|..|   .|:..:|        ..:.:.||..|..|:.:.|   
plant   627 NKLSVVILRGFDARIREYIKNRKQW---QEKKDKE--------WTVSRALVGALDYLQGKTSIIE 680

  Fly   602 ANL----FTQTLRLIAHQIDDFMLESMVM-NTKFSAAGAAQFNYDMTRNLFALFGQYTRRPELLF 661
            .||    ||...|.:|.:||.....|::| |.||:..|..:...|| ..|:.:|..:..|||..|
plant   681 ENLNKADFTAMWRTLASEIDKLFFNSILMANVKFTNDGVERLKVDM-EVLYGVFRTWCVRPEGFF 744

  Fly   662 KRTHDACKLLAAARGTALLLLETLRGNQSVEEKTKPLRELHVLSMDSKQCIEVLERRM 719
            .:         .:.|..||.:|..:....:....|.|||..:..:...:..:|.:.|:
plant   745 PK---------LSEGLTLLKMEEKQVKDGLSRGDKWLRENRIRYLSEAEAKKVAKSRV 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rint1NP_648102.2 RINT1_TIP1 260..718 CDD:461309 114/520 (22%)
MAG2NP_190354.1 RINT1_TIP1 299..788 CDD:461309 113/519 (22%)

Return to query results.
Submit another query.