DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rint1 and rint1

DIOPT Version :10

Sequence 1:NP_648102.2 Gene:Rint1 / 38807 FlyBaseID:FBgn0035762 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001038468.2 Gene:rint1 / 562894 ZFINID:ZDB-GENE-041210-174 Length:780 Species:Danio rerio


Alignment Length:748 Identity:250/748 - (33%)
Similarity:375/748 - (50%) Gaps:79/748 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IVARLNEEIGKDASQLHRASHLVSHY---KKHLQVLSQTLDYEDPQNVSCYKTAFQCQQQVCESI 73
            |||.:.:|||.|...|.:.|.|:...   .|.|:...||:....|..||....|.:..|:...|:
Zfish    40 IVALVQKEIGGDLKSLKKVSGLLEKLTLENKQLEEQVQTVSSSGPLRVSAALRAAEESQKKLGSL 104

  Fly    74 DFELEKLAHFEDKLKRKLKECQPVLEGVAEDLDKVRQLQRLQQYLLLVQDIQEISAALGNAINGK 138
             .|.|:|  ..:||::.|:..|...:.:.:.|.::..|::..:||..:..|:|:|.::...:...
Zfish   105 -LENERL--LSNKLQQHLQGAQVWTDSIGQVLGQLDTLEKHMKYLQCLARIEELSDSIQQYLMTN 166

  Fly   139 DE-------DKLVNIYLTLYEGNDCEHSVVGRLHAVQAQSLKSFAERTAIYWHKLLLKRLSSAFE 196
            ..       |.:.::.:.|.|.        |.||      |::|...|..:|||:|..:|:|.||
Zfish   167 SVWDAVRAIDSMASLDMDLRES--------GCLH------LQAFLRETLRFWHKILKDKLTSDFE 217

  Fly   197 AVLKSMRWAHLEQQALNYS---SARD-TAKAQLLAEYMF-------LIKSPAEERA-PLQSITPS 249
            .||..:.|..:.......|   :|:: .::.:||...:.       ||....|..: |.||.|| 
Zfish   218 EVLTQLHWPFISAPTQTLSPPANAQELNSQLELLVSQLLSLQTSDDLISENKETSSRPGQSQTP- 281

  Fly   250 IVCQPINRVVQLLLAPYRQRFQFHFTGTRQTNRLDKPEWFYTQILNWGKETHFFVGKTFQPAAIK 314
                |::..:|::|.|..:||::||||.||||.|.||||:.||||.|......|:.:..||...:
Zfish   282 ----PLSLPIQIMLLPLSKRFRYHFTGNRQTNSLSKPEWYLTQILIWMGNNSNFMDEKVQPILDR 342

  Fly   315 AGKLDYNLRLEFIRGLVQLAIEKLAVDIEQIAQDQILFAHLLDETLAFESELRETFGYPASFPSA 379
            ||. :.|.|:|..|||:.||.||||.|..::..|..||.||:||.|.||.|||.|..||.::|..
Zfish   343 AGG-NVNARVELCRGLLTLAQEKLAHDAPRLLYDDALFCHLVDEVLQFEKELRSTHSYPRAYPGV 406

  Fly   380 ISVITQPMYLLRWISLEERFCAEKMDDILQAETPF--QLIDPNSFENDLKIPKCADQFMRLLDAI 442
            :.::.:.....:|:|:|.:...||:|.:|.||..:  |..|....: :||.|.||:.||.||..|
Zfish   407 LHILLEESVFQKWLSVERKMAVEKVDAMLSAEGAWSSQYKDITDMD-ELKAPDCAETFMTLLLVI 470

  Fly   443 KDRYYGLIQPGHQLQFLHLQLELIDSFRQRLVQLHSSGAVPSI-----PILNAINYLVMVLREWG 502
            .:||..|.....||.||.||.||:|.||.||.|:....:...:     .||||.||:..||.:||
Zfish   471 TERYRSLPCQRAQLSFLALQKELVDDFRIRLTQVMKEESRQPLSSRYSAILNAANYISTVLSDWG 535

  Fly   503 ENVHYLHLHAA-------LAGP-NATEI-------NSVFEHAVAELEHWARQLMRNLATKATNEM 552
            :||.:|.|..|       :.|| .|||.       .|:||..:|.||.....::..|......::
Zfish   536 DNVFFLQLQQAAVSVGEEILGPLGATESGRLASLEGSLFEELLALLERLRGDMLGRLLDAVMRDV 600

  Fly   553 KAKSMSYRRDAWPTMPEQNSREPFILSPSGGEMFQVLVTLLHNLERELSANLFTQTLRLIAHQID 617
            |.|:..|.:|.|.::|.|:.:....||.|...|...|...|..|::.|...||....:.:|.::|
Zfish   601 KEKAQPYCKDRWISLPSQSDQATMSLSSSACPMMLCLRDHLLQLQQMLCLPLFQMFWQGLAERLD 665

  Fly   618 DFMLESMVMNTKFSAAGAAQFNYDMTRNLFALFGQYTRRPELLFKRTHDACKLLAAARGTALLLL 682
            .|:.|.:::...|:..||||..||||||||.|||.|.:|||..||...:||.:|....|.|||||
Zfish   666 CFIYEDLILYNHFNEGGAAQLQYDMTRNLFPLFGHYCKRPENFFKHVKEACIILTLKVGPALLLL 730

  Fly   683 ETLRGNQSVE------EKTKP---LRELHVLSM 706
            :.|:  ||.|      :::.|   |.||.:..:
Zfish   731 DVLK--QSEEDSLPNHQQSSPESALNELGIYKL 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rint1NP_648102.2 RINT1_TIP1 260..718 CDD:461309 183/478 (38%)
rint1NP_001038468.2 RINT1_TIP1 285..773 CDD:461309 183/481 (38%)

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