DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF4 and TUS1

DIOPT Version :10

Sequence 1:NP_648101.1 Gene:RhoGEF4 / 38806 FlyBaseID:FBgn0035761 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_013529.3 Gene:TUS1 / 851145 SGDID:S000004417 Length:1307 Species:Saccharomyces cerevisiae


Alignment Length:530 Identity:99/530 - (18%)
Similarity:175/530 - (33%) Gaps:165/530 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NPDAGKRLGFRRQAIQEIISSEKSYLEQLELLMNFFVRPLKEQAIIDCSN-HTLLFGQIEMIHNL 124
            ||...:|..|    |.::|..|:..|......:..:.:...:..:.|... ..|.|...|.:..|
Yeast   462 NPREVQRQSF----IFDLIILEERSLNMATAAVEIYGKRFDKSLLPDEPEFKALAFDIFEPLIQL 522

  Fly   125 NGEFLRELEANMENVAHAFLKMAPFF--------------KLYSVYA-------FDYRGALFIIQ 168
            :.|||                :.|.|              |:||.:.       .:|..|:..:.
Yeast   523 HTEFL----------------LTPIFWKLKTRGKFIDGVGKIYSKWCGEAKNIYLNYAKAMATVH 571

  Fly   169 DLI---SKNPV-FRKFLEQTESRPEVQRK------------LNSLMIVPIQRVPRYKLLLEQVLL 217
            ::|   .||.. |..:|::.::..|:.|.            ..||..:|:        .|..:|.
Yeast   572 EIIMWEKKNKTKFVTWLKEIDNSVEITRSKMYHDVIFFGGFFKSLQNMPV--------TLRSILK 628

  Fly   218 YTSPADADYKLLKESVKEIEATASHIN----TCVEEQEITQY---LIHLQNSLVNRTP------- 268
            .|.|:..||:.||..:||:|.....:|    ..::.:::.::   |:...|| .|.|.       
Yeast   629 NTDPSMEDYEYLKIVIKEVEKLNFEVNQVHGLAIDHRKLVRFSKQLVLSTNS-SNATSYVNVGGS 692

  Fly   269 ---------------NIVKPSRRVIKEGVLQK---------------------ITH---KGTEIK 294
                           .:..|.|:::..|.:.|                     ||.   || |.:
Yeast   693 TNANDDDAIQDKLALGLTYPERKLVLSGTVYKKRDLWLDPTPVYIALLDNCLLITEEISKG-ETQ 756

  Fly   295 RYCVLMSDI-FMYCKMIKERAPNTVVENSLECCCIFPLKKC--KVYEMLPGNFKLTCQSDGIIFG 356
            :|.::...| ..|..:.|.:.|.|..:         ||:..  |.::....||.....|...:..
Yeast   757 KYKLIERPIPIDYLSLEKRKIPGTSKQ---------PLRNYSQKEHKSPMHNFSTPINSMRPLLK 812

  Fly   357 S---------GDVQLSRTWVGFIRDAID-LHVQCRKTLRKDSSKRTPIRKKDMKKFGADYVLSPN 411
            |         ||.:.|.|.:.......| ...:.|.|...:|.|......:.:.:: .|.::...
Yeast   813 SSGNHMSTAYGDRKTSNTEISNANPNTDEFSFKIRNTATGESFKFFTESAEVLNQW-IDAIMESF 876

  Fly   412 KRKCEYDTVFRNKNRSTDSEEET---EDSACFSRKRKVASGILRAPNGNPMG--------KASSS 465
            ||..|        |...::.|.|   .:.|.|.:...|...:  ||.|:.:.        ||:..
Yeast   877 KRNAE--------NHDLNAFEFTVLSSEFAYFDKDAPVNLPV--APEGSEIDVALKAYAQKANKD 931

  Fly   466 SSSSVSMKRV 475
            |.|.....|:
Yeast   932 SCSWSKTTRI 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF4NP_648101.1 RhoGEF 74..244 CDD:459876 40/207 (19%)
PH-like 269..>311 CDD:473070 12/66 (18%)
PH 277..374 CDD:459697 24/132 (18%)
TUS1NP_013529.3 RhoGEF 469..655 CDD:238091 41/213 (19%)
CNH 939..1287 CDD:214481 1/3 (33%)

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