DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGEF4 and Plekhf2

DIOPT Version :10

Sequence 1:NP_648101.1 Gene:RhoGEF4 / 38806 FlyBaseID:FBgn0035761 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_780384.1 Gene:Plekhf2 / 71801 MGIID:1919051 Length:249 Species:Mus musculus


Alignment Length:197 Identity:40/197 - (20%)
Similarity:71/197 - (36%) Gaps:59/197 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 LQNSLVN-RTPNIVK------------PSRRVIKEGVLQKITHKGTEIKRYCVLMSDIFMYCKMI 310
            |.||..| |..:||:            |.|.:|.||||.|:..|..:.::: .|.:||.:|..::
Mouse     5 LANSEANTRRISIVESCFGAAGQPLTIPGRVLIGEGVLTKLCRKKPKARQF-FLFNDILVYGNIV 68

  Fly   311 KERAPNTVVENSLECCCIFPLKKCKV------YEMLPGNFKLTCQSDGIIFGSGDVQLSRTWVGF 369
            .::.......       |.||:...:      .|:..|....|......::.:...:.|. |:..
Mouse    69 IQKKKYNKQH-------IIPLENVTIDSIKDEGELRNGWLIKTPTKSFAVYAATATEKSE-WMNH 125

  Fly   370 IRDAI-DLHVQCRKT------------------LRKDSSKRTPIRKKDMKKFGADYVLSPNKRKC 415
            |...: ||..:..||                  :|...:|.||:.::.            :.|||
Mouse   126 INKCVTDLLSKSGKTPSNEHAAVWVPDSEATVCMRCQKAKFTPVNRRH------------HCRKC 178

  Fly   416 EY 417
            .:
Mouse   179 GF 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF4NP_648101.1 RhoGEF 74..244 CDD:459876
PH-like 269..>311 CDD:473070 15/53 (28%)
PH 277..374 CDD:459697 20/102 (20%)
Plekhf2NP_780384.1 PH_Phafin2-like 7..129 CDD:269927 28/130 (22%)
FYVE_PKHF2 148..211 CDD:277294 7/45 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..249
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.