Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_699627.3 | Gene: | prex1 / 570984 | ZFINID: | ZDB-GENE-030131-1428 | Length: | 1622 | Species: | Danio rerio |
Alignment Length: | 266 | Identity: | 68/266 - (25%) |
---|---|---|---|
Similarity: | 133/266 - (50%) | Gaps: | 27/266 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 DAGKRLGFRRQAIQEIISSEKSYLEQLELLMNFFVRPLKE----QAIIDCSNHTLLFGQIEMIHN 123
Fly 124 LNGEFLRELEANME-------NVAHAFLKMAPFFKLYSVYAFDYRGALFIIQDLISKNPVFRKFL 181
Fly 182 --------EQTESRPEVQRKLNSLMIVPIQRVPRYKLLLEQVLLYTSPADADYKLLKESVKEIEA 238
Fly 239 TASHINTCVEEQEITQYLIHLQNSLVN-RTPNIVKPSRRVIKEGVLQKITHKGTEIKRYCVLMSD 302
Fly 303 IFMYCK 308 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 48/188 (26%) |
PH-like | 269..>311 | CDD:302622 | 11/40 (28%) | ||
PH | 277..374 | CDD:278594 | 10/32 (31%) | ||
prex1 | XP_699627.3 | RhoGEF | 32..216 | CDD:279015 | 49/189 (26%) |
PH_Collybistin_ASEF | 221..372 | CDD:269931 | 15/60 (25%) | ||
PH | 249..363 | CDD:278594 | 10/32 (31%) | ||
DEP | 390..470 | CDD:295306 | |||
DEP_2_P-Rex | 482..574 | CDD:239887 | |||
PDZ | 600..678 | CDD:214570 | |||
PDZ_signaling | 684..745 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |