Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001027010.1 | Gene: | arhgef11 / 565268 | ZFINID: | ZDB-GENE-070604-1 | Length: | 1417 | Species: | Danio rerio |
Alignment Length: | 795 | Identity: | 155/795 - (19%) |
---|---|---|---|
Similarity: | 269/795 - (33%) | Gaps: | 202/795 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FTPR------------QKGYGNGFIHSPQTPLSFSRELRQVLQERNLLTAKSRRKVC-------- 46
Fly 47 -------SMLDSNNSSPIGSPNPDAG--KRLGFRRQAIQEIISSEKSYLEQLELLMNFFVRPLKE 102
Fly 103 QAIIDCSNHTLLFGQIEMIHNLNGEFLREL----------------------EAN---MENVAHA 142
Fly 143 FLKMAPFFKLYSVYAFDYRGALFIIQDLISKNPVFRKFLEQTESRPEVQR-KLNSLMIVPIQRVP 206
Fly 207 RYKLLLEQVLLYTSPADADYKLLKESVKEIEATASHINTCVEEQE----ITQY--------LIHL 259
Fly 260 QNSLVNRTPNIVKPSRRVIKEGVLQKITHKGTEIKRYCVLMSDIFMYCKMIKERAPNT------- 317
Fly 318 ------VVENSLECCCIFPLKKCKVYEMLPGNFKL----TCQSDGIIFGSGDVQLSRTWVGFIRD 372
Fly 373 AIDLHVQCRKTLRKDSSKRTP---IRKKDMKKFGADYVLSPNKRKCEYDTVFRNKNRSTDSEEET 434
Fly 435 ED---SACFSRKRKVASGIL---------------------------------RAPNGNPMGKAS 463
Fly 464 SSSSSSVSMKRVAPPPPAPPP----PPAVQ-MRHQPG----RPGEL---ATASKENRI-SKLYKK 515
Fly 516 IAAGDKVAN-----------VRGILKRSNVPAPNNDHDP-----------SYGFASRYSDSKSYF 558
Fly 559 RAHNVDNTIPTFVKREDLFNGDNMFPVHLKSHEEICTPPQKKRVKFDDTLDAVSPVLVEKPFAFS 623
Fly 624 SESSSAL--KPTSLR 636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 40/195 (21%) |
PH-like | 269..>311 | CDD:302622 | 10/41 (24%) | ||
PH | 277..374 | CDD:278594 | 21/113 (19%) | ||
arhgef11 | NP_001027010.1 | PDZ_signaling | 49..123 | CDD:238492 | |
DegQ | <71..140 | CDD:223343 | |||
RGS_PDZRhoGEF | 300..446 | CDD:188707 | |||
RhoGEF | 737..918 | CDD:279015 | 40/196 (20%) | ||
PH-like | 935..1075 | CDD:302622 | 27/143 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |