Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093450.1 | Gene: | fgd6 / 556459 | ZFINID: | ZDB-GENE-041210-200 | Length: | 1315 | Species: | Danio rerio |
Alignment Length: | 582 | Identity: | 132/582 - (22%) |
---|---|---|---|
Similarity: | 234/582 - (40%) | Gaps: | 140/582 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 EIISSEKSYLEQLELLMNFF-----------VRPLKEQAIIDCSNHTLLFGQIEMIHNLNGEFLR 130
Fly 131 ELEANMENVAH---------AFLKMAPFFKLYSVYAFDYRGALFIIQDLISKNPVFRKFLEQTES 186
Fly 187 RPE-VQRKLNSLMIVPIQRVPRYKLLLEQVLLYTSPADADYKLLKESVKEIEATASHINTCVEEQ 250
Fly 251 EITQYLIHLQNSLVNRTPNIVKPSRRVIKEGVLQKITHKGTEIKRYCVLMSDIFMYCKMIK---- 311
Fly 312 ------------------------------ER----APNTVVENS--LECCCI----FPLKKCKV 336
Fly 337 Y----EMLPGNFKLTCQSDGIIFGSGDVQLSRTWVGFIRDAIDLHVQCRKTL--RKDSSK---RT 392
Fly 393 PIRKKDMKKFGADYVLSPNKRKCEYDTV-FRNK---NRSTDSEEETEDSACFSRKRKVASGILRA 453
Fly 454 PNGNPMGKASSSSSSSVSMKRVAPPPPAPPPPPAVQMRHQPGRPGELATASKENRISKLYKKIAA 518
Fly 519 GDKVANVRGILKRSNVPAPNNDHDPSYGFASRYSDS----KSYFRAHNVDNTIPTFVKREDL 576 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 53/187 (28%) |
PH-like | 269..>311 | CDD:302622 | 15/41 (37%) | ||
PH | 277..374 | CDD:278594 | 27/144 (19%) | ||
fgd6 | NP_001093450.1 | DUF4775 | <93..327 | CDD:292620 | |
RhoGEF | 773..957 | CDD:279015 | 53/188 (28%) | ||
PH-like | 975..1097 | CDD:302622 | 25/123 (20%) | ||
PH | 990..1080 | CDD:278594 | 17/90 (19%) | ||
FYVE_FGD6 | 1113..1173 | CDD:277282 | 11/59 (19%) | ||
PH | 1221..1313 | CDD:278594 | 20/113 (18%) | ||
PH2_FGD5_FGD6 | 1221..1309 | CDD:270057 | 20/113 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X316 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |