DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF4 and net1

DIOPT Version :10

Sequence 1:NP_648101.1 Gene:RhoGEF4 / 38806 FlyBaseID:FBgn0035761 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_021330686.1 Gene:net1 / 493607 ZFINID:ZDB-GENE-041121-18 Length:605 Species:Danio rerio


Alignment Length:494 Identity:98/494 - (19%)
Similarity:193/494 - (39%) Gaps:97/494 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RRKVCSML-----DSNNSSPIGSPNPDAGKRLGF------RRQAIQEIISSEKSYLEQLELLMNF 95
            ::|.||..     ....:|.:.|...|..::..|      |::||.|:...|:..:|.|:|....
Zfish   134 QQKPCSKAAAPTPPKRRNSTLWSETLDVHQKGTFSTKEIKRQEAIFELSRGEQDLIEDLKLARKA 198

  Fly    96 FVRPLKEQAIIDCSNHTLLFGQIEMIHNLNGEFLREL------EANMENVAHAFLKMAPFFKLYS 154
            :..|:.:.:|:.....|.:||.::....|:.:.|.:|      :..:..:....:...|....|.
Zfish   199 YHDPMLKLSIMSEEELTAIFGDLDAYIPLHEDLLDQLAKATGTDGTVRQIGKIVVDWLPRLNAYR 263

  Fly   155 VYAFDYRGALFIIQDLISKNPVFRKFLEQTESRPEVQRKLN--SLMIVPIQRVPRYKLLLEQVLL 217
            .|..:...|..:: |...::|..:.||::....| ..|||:  |.:.:|..|:.:|.|||:::|.
Zfish   264 AYCSNQLAAKALL-DQKKQDPRVQDFLQRCLESP-FSRKLDLWSFLDIPRSRLVKYPLLLKEILR 326

  Fly   218 YTSPADADYKLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRTPNIVKPSRRVIKEGV 282
            :|.|...|...|::::..|:|..:.||....|.|...|:..|:.....:....::..:.::..|.
Zfish   327 HTPPDHPDKGSLEQAISVIQAVLADINMKKGESECQYYIDKLEYLEDKQKDPRIEQCKSLLCHGE 391

  Fly   283 LQKITHKGTEIKRYCVLMSDIFMYCKMIKERAPNTVVENSLECCCIF----PLKKCKVYEMLPGN 343
            |:  ...||::        .:|::.:::....|  |..|...|..::    |::...:.::..|:
Zfish   392 LR--NKSGTKL--------HVFLFTEVLILTRP--VTRNDRHCFQVYRQPIPVQDLVLEDLQDGD 444

  Fly   344 ------------------------FKLTCQSDGIIFGSGDVQLSRTWVGFIRDAIDLHVQCRKTL 384
                                    |:...|.........||...:.|:..:|:|  :..|...||
Zfish   445 VRMGGSFRGAFSNADKAKNIFRVRFQDASQGQSHTLQVNDVFHKQQWLNCLRNA--MSTQKDLTL 507

  Fly   385 RKDSSKRTPIRKKDMKKFGADYVLSPNKRKCEYDTVFRNKNRSTDSEEETEDSACFSRKRKVASG 449
            .::....||......|:                    |:.:.||..:.:..|..|   .|..|| 
Zfish   508 SENEPLTTPATDVCAKR--------------------RSSSVSTVIQMDEMDENC---PRAAAS- 548

  Fly   450 ILRAPNG-------NPMGKASSSSSSSVSMKRVAPPPPA 481
               ||:.       :|...|:|:.|||.|...::.|.|:
Zfish   549 ---APSSPSSEEPPSPTPSATSTLSSSSSSSSISAPIPS 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF4NP_648101.1 RhoGEF 74..244 CDD:459876 41/177 (23%)
PH-like 269..>311 CDD:473070 5/41 (12%)
PH 277..374 CDD:459697 17/124 (14%)
net1XP_021330686.1 RhoGEF 177..353 CDD:214619 41/177 (23%)
PH-like 367..500 CDD:473070 19/146 (13%)

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