DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF4 and CG30440

DIOPT Version :10

Sequence 1:NP_648101.1 Gene:RhoGEF4 / 38806 FlyBaseID:FBgn0035761 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster


Alignment Length:481 Identity:99/481 - (20%)
Similarity:198/481 - (41%) Gaps:69/481 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RRQAIQEIISSEKSYLEQLELLMNFFVRPLKEQAIIDCS---NHTLLFGQIEMIHNL-NGEFLRE 131
            |...::|:..:||.|:.::..::..:...||.......|   ...:|||.:..|::. |..||::
  Fly   619 RGHILKELFETEKIYVNEIASILKGYYDRLKSDESAPASLQGKANVLFGNLNEIYSFHNDVFLKD 683

  Fly   132 LE---ANMENVAHAFLKMA-PFFKLYSVYAFDYRGALFIIQDLISKNPVFRKFLEQTESRPEVQR 192
            ||   :..|.||..|:|.. .|::|||.|..:.:.:..:.:.|:..:..|:      |.:..:..
  Fly   684 LENCISVTERVALCFVKRRDKFYQLYSFYCQNIQRSEKLRETLVDTHMFFK------ECQIGLGH 742

  Fly   193 K--LNSLMIVPIQRVPRYKLLLEQVLLYTSPADADYKLLKESVKEIEATASHINTCVEEQEITQY 255
            |  |.:.::.|:||:.:|:|||:.:||:|. .|:....||.::..:......:|..:.:..||.:
  Fly   743 KLPLGAYLLKPVQRITKYQLLLKDLLLFTD-NDSCRNELKNALDCMLIVLKCVNDSMHQISITGF 806

  Fly   256 LIHLQNSLVNRTPNIVKPSRRV---IKEGVLQKITHKGTEIKRYCVLMSDIFMYCKMIKERAPNT 317
                ...|..:...:::.|.:|   .|:.:..::..|    :|:..|.....:.||...:...| 
  Fly   807 ----SGDLAKQGELLMQDSFQVWIESKKDIRLRMKPK----RRHIFLYQKSLLLCKQTSKSGYN- 862

  Fly   318 VVENSLECCCIFPLKKCKVYEMLPGNFK-----LTCQSDGIIFGSGDVQLSRTWVGFIRDAIDLH 377
              ::|.:......:.:..:.|.:.|:.|     |..:.:.....:..:.:...||..|:..  |.
  Fly   863 --KSSYQFKSDVKMSQIGLTESVSGDAKRFEVWLKGRQEVYTLQASTIGVKEMWVAEIKRV--LF 923

  Fly   378 VQCRKTLRKDSSKRTPIRKKDM-KKFGADYVLSPNKRKCE------YDTVFRNKNRSTDSEEETE 435
            .|..| |:.|...|..||.:.: :|...:   :||...|.      ::....:.||:|:...|  
  Fly   924 NQLEK-LKGDQIARYNIRHQSLWQKSSCE---APNITHCSLRRTECFELPLNDSNRNTNIRSE-- 982

  Fly   436 DSACFSRKRKVASGILRAPNGNPMGKASSSSS--SSVSMKRVAPPPPAPPPPPAVQMRHQPGRPG 498
             ..|.|.:     .|:..|:.....:.:|.||  |.:.......|          .:..:.|:|.
  Fly   983 -KTCLSDQ-----NIVNGPSVQDQHEKNSWSSDCSDIDEDETINP----------ILMQKTGQPK 1031

  Fly   499 ELATASKENRISKLYKKIAAGDKVAN 524
            .|...|..:::....|.|.:...|.|
  Fly  1032 LLWNRSSSHQVFIKSKYILSRKTVNN 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF4NP_648101.1 RhoGEF 74..244 CDD:459876 44/179 (25%)
PH-like 269..>311 CDD:473070 8/44 (18%)
PH 277..374 CDD:459697 16/104 (15%)
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 44/180 (24%)
PH-like 802..925 CDD:473070 21/135 (16%)

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