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Protein Alignment RhoGEF4 and Prex2
DIOPT Version :9
Sequence 1: | NP_648101.1 |
Gene: | RhoGEF4 / 38806 |
FlyBaseID: | FBgn0035761 |
Length: | 647 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001380724.1 |
Gene: | Prex2 / 312912 |
RGDID: | 1307865 |
Length: | 1598 |
Species: | Rattus norvegicus |
Alignment Length: | |
Identity: | / - (0%) |
Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RhoGEF4 | NP_648101.1 |
RhoGEF |
74..244 |
CDD:279015 |
|
PH-like |
269..>311 |
CDD:302622 |
|
PH |
277..374 |
CDD:278594 |
|
Prex2 | NP_001380724.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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