Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038938943.1 | Gene: | Ngef / 246217 | RGDID: | 1309055 | Length: | 700 | Species: | Rattus norvegicus |
Alignment Length: | 416 | Identity: | 92/416 - (22%) |
---|---|---|---|
Similarity: | 173/416 - (41%) | Gaps: | 80/416 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 72 RQAIQEIISSEKSYLEQLELLMNFFVRPLKEQAIIDCSNHTLLFGQIEMIHNLNGEFLRELEANM 136
Fly 137 -ENVAHA------FLKMAPFFKLYSVYAFDYRGALFIIQDLISKNPVFRKFLEQTESRPEVQ-RK 193
Fly 194 LNSLMIVPIQRVPRYKLLLEQVLLYTSPADADYKLLKESVKEIEATASHINTCVEEQEITQYLIH 258
Fly 259 LQNSL---VNRTPNIVKPSRRVIKEGVLQKI----THKGTEIKR-----YCVLMSDIFMYCKMIK 311
Fly 312 ERAPNTVVENSLECCCIFPLKKCKVYEMLP-GNFKLTCQSDGIIFGSGDVQLSRTWVGFIRDAID 375
Fly 376 LHVQCRKTLRKDSSKRTPIRKKDMKKFGADYVLSPNKR----------------KCEYDTVFRNK 424
Fly 425 NRST-------DSEEETEDSACFSRK 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 46/177 (26%) |
PH-like | 269..>311 | CDD:302622 | 13/50 (26%) | ||
PH | 277..374 | CDD:278594 | 18/106 (17%) | ||
Ngef | XP_038938943.1 | RhoGEF | 267..445 | CDD:395496 | 46/177 (26%) |
PH_ephexin | 467..593 | CDD:269929 | 33/161 (20%) | ||
SH3_ephexin1 | 606..660 | CDD:212872 | 8/39 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |