Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032027.2 | Gene: | Fgd1 / 14163 | MGIID: | 104566 | Length: | 960 | Species: | Mus musculus |
Alignment Length: | 374 | Identity: | 97/374 - (25%) |
---|---|---|---|
Similarity: | 164/374 - (43%) | Gaps: | 71/374 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 EIISSEKSYLEQLELLMNFFVRPLKEQAIIDCSNHTL--------LFGQIEMIHNLNGEF-LREL 132
Fly 133 EANME------NVAHAFLKMAPFFKLYSVYAFDYRGALFIIQDLISKNPVFRKFLEQTESRPEVQ 191
Fly 192 RK-------LNSLMIVPIQRVPRYKLLLEQVLLYTSPADADYKLLKESVKEIEATASHINTCVEE 249
Fly 250 QEITQYLIHLQNSLVNRTPNIVKPSRRVIKEGVLQKITHK-GTEIKRYCVLMSDIFMYC------ 307
Fly 308 --KMIKERAPNTVVENSLECCCIFPLKKCKVYEMLPGNFKLTCQSDGIIFGSGDVQLSRTWVGFI 370
Fly 371 RDAIDLHVQCRKTLR------------------KDSSKR--TPIRKKDM 399 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 53/188 (28%) |
PH-like | 269..>311 | CDD:302622 | 17/50 (34%) | ||
PH | 277..374 | CDD:278594 | 26/105 (25%) | ||
Fgd1 | NP_032027.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..210 | ||
SH3-binding. /evidence=ECO:0000255 | 171..187 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 226..355 | ||||
RhoGEF | 375..558 | CDD:238091 | 53/188 (28%) | ||
PH1_FGD1 | 590..697 | CDD:275392 | 28/115 (24%) | ||
PH | 590..687 | CDD:278594 | 26/105 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 701..725 | 3/23 (13%) | |||
FYVE_FGD1_2_4 | 724..788 | CDD:277280 | 5/9 (56%) | ||
PH2_FGD1-4 | 814..919 | CDD:270056 | |||
PH | 822..920 | CDD:278594 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 922..960 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X316 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.770 |