Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031759716.1 | Gene: | prex2 / 100490424 | XenbaseID: | XB-GENE-6048678 | Length: | 1603 | Species: | Xenopus tropicalis |
Alignment Length: | 276 | Identity: | 71/276 - (25%) |
---|---|---|---|
Similarity: | 126/276 - (45%) | Gaps: | 19/276 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 GSPNPDAGKRLGFRRQAIQEIISSEKSYLEQLELLMN-FFVRPLKEQAIIDCSNHT-----LLFG 116
Fly 117 QIEMIHNLNGEFLRELE-------ANMENVAHAFLKMAPFFKLYSVYAFDYRGALFIIQDLISKN 174
Fly 175 PVFRKFLEQ---TESRPEVQRKLNSLMIVPIQRVPRYKLLLEQVLLYTSPADADYKLLKESVKEI 236
Fly 237 EATASHINTCVEEQEITQYLIHLQNSLVN-RTPNIVKPSRRVIKEGVLQKITHKGTEIKRYCVLM 300
Fly 301 SDIFMYCKMIKERAPN 316 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 48/185 (26%) |
PH-like | 269..>311 | CDD:302622 | 12/41 (29%) | ||
PH | 277..374 | CDD:278594 | 13/40 (33%) | ||
prex2 | XP_031759716.1 | RhoGEF | 24..209 | CDD:395496 | 48/185 (26%) |
PH_Collybistin_ASEF | 215..362 | CDD:269931 | 17/68 (25%) | ||
DEP | 379..459 | CDD:413322 | |||
DEP_2_P-Rex | 471..563 | CDD:239887 | |||
PDZ | 672..740 | CDD:214570 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |