Sequence 1: | NP_648101.1 | Gene: | RhoGEF4 / 38806 | FlyBaseID: | FBgn0035761 | Length: | 647 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017947731.2 | Gene: | fgd6 / 100379840 | XenbaseID: | XB-GENE-5824462 | Length: | 1352 | Species: | Xenopus tropicalis |
Alignment Length: | 597 | Identity: | 136/597 - (22%) |
---|---|---|---|
Similarity: | 232/597 - (38%) | Gaps: | 145/597 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 SNNSSPIGSPNPDAGKRLGFRRQA-----IQEIISSEKSYLEQLELL-MNF----------FVRP 99
Fly 100 LKEQAIIDCSNHTLLFGQIEMIHNLNGEFLRELEANM------ENVAHAFLKMAPFFKLYSVYAF 158
Fly 159 DYRGALFIIQDLISKNPVFRKFLEQTESRPE-VQRKLNSLMIVPIQRVPRYKLLLEQVLLYTSPA 222
Fly 223 DADYKLLKESVKEIEATASHINTCVEEQEITQYLIHLQNSLVNRTPNIVKPSRRVIKEGVLQKIT 287
Fly 288 HKGTEIKRYCVLMSDIFMYCKMIKERAPNTVVENSL-ECCCIFPLKKCKV----YEMLPGNFKLT 347
Fly 348 CQSDGIIFGSGDVQLSRTWVGFIRDAIDLHVQCRKTLR--KDSSKRTPIRKKDMKKFG------- 403
Fly 404 ------------ADYVL------------------SPNKRKCEYDTVFRNKN---RSTDSEEETE 435
Fly 436 DSACFSRKRKVASGILRAPN-GNPMGKASSSSSSSVSMKRVAPPPPAPPPPPAVQMRHQPGRPGE 499
Fly 500 LATASKENRISKLYKKIAAGDKVANVRGILKRSNVPAPNNDHDPSYGFASRYSDSKSYFRAHNVD 564
Fly 565 NTIPTFVKREDL 576 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF4 | NP_648101.1 | RhoGEF | 74..244 | CDD:279015 | 54/192 (28%) |
PH-like | 269..>311 | CDD:302622 | 14/41 (34%) | ||
PH | 277..374 | CDD:278594 | 19/101 (19%) | ||
fgd6 | XP_017947731.2 | RhoGEF | 799..982 | CDD:395496 | 54/187 (29%) |
PH1_FGD6 | 1001..1123 | CDD:275436 | 29/132 (22%) | ||
FYVE_FGD6 | 1140..1200 | CDD:277282 | 10/72 (14%) | ||
PH2_FGD5_FGD6 | 1258..1346 | CDD:270057 | 11/52 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm49235 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X316 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |