Protein Alignment MED4 and pmc4

DIOPT Version :9

• Sequence 1: NP_648094.1
• Gene: MED4 / 38799
• FlyBaseID: FBgn0035754
• Length: 258
• Species: Drosophila melanogaster
• Sequence 2: NP_596462.1
• Gene: pmc4 / 2539994
• PomBaseID: SPBC1105.06
• Length: 239
• Species: Schizosaccharomyces pombe
• Alignment Length: 162
• Identity: 28/162 - (17%)
• Similarity: 70/162 - (43%)
• Gaps: 30/162 - (18%)

  Fly    15 IDDIEMIAKELIEQAHQKISSTELVDLLDLLVAKDEEFRKMLELAEEQAKVEEAMDQLRAKVEVH 79
            ||.||....:.:..:.:|:....|::....||.   ..:.:..|........|..:::.:.:: .
pombe     7 IDSIEECLNKQLRLSSEKVDQYVLIENWTSLVG---HLKTLHSLISNYTNGRELQNEISSLLK-Q 67

  Fly    80 DREIQ-KLQKSLKDAELILSTAIFQARQKLASINQANKRPVSSEELIKYAHRISSANA------- 136
            |:|:. ::|..:::...|..|.:.:      :::...::.|::|.|:.|..::|..::
pombe    68 DKELDLQIQDCMREMTSIYDTHLPK------TVSGRKRQKVNAETLLDYGRKLSKFSSAPPGYNP 126

  Fly   137 -----VSAPLTWCIGDLRRPYPTDIEMRNGLL 163
                 ..||:.:       |:|::.:||..||
pombe   127 ETGQDAKAPVHY-------PWPSEDQMRKTLL 151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED4	NP_648094.1	Med4	47..189	CDD:287038	20/130 (15%)
pmc4	NP_596462.1	Med4	41..>153	CDD:287038	20/125 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR13208
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100