DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED4 and MED4

DIOPT Version :10

Sequence 1:NP_648094.1 Gene:MED4 / 38799 FlyBaseID:FBgn0035754 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_309615.3 Gene:MED4 / 1270863 VectorBaseID:AGAMI1_006732 Length:263 Species:Anopheles gambiae


Alignment Length:267 Identity:162/267 - (60%)
Similarity:203/267 - (76%) Gaps:16/267 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFHLSTKERLLLLIDDIEMIAKELIEQA----HQKISSTELVDLLDLLVAKDEEFRKMLELAEEQ 62
            |:||||:||||.:|:|||::||||||..    .||:|||:...|::|||.||:|.:..|:||.||
Mosquito     3 SYHLSTRERLLAIINDIEIVAKELIENTIAPKAQKMSSTDHAQLVELLVLKDKELKATLQLAAEQ 67

  Fly    63 AKVEEAMDQLRAKVEVHDREIQKLQKSLKDAELILSTAIFQARQKLASINQANKRPVSSEELIKY 127
            |.:|:.||.||.:|...|.||.:||:.||:||.||:|:|||||||||||.:|||||||||||||:
Mosquito    68 AGIEKNMDALREQVRKQDEEINQLQRQLKEAEQILATSIFQARQKLASIAKANKRPVSSEELIKF 132

  Fly   128 AHRISSANAVSAPLTWCIGDLRRPYPTDIEMRNGLLGKSEQNINGGTVTHQNSGMPSEQQRTLSG 192
            |||||:::|:.|||||..||||||||||||||.|.||||:.||||..:.|.||  .:|..|..| 
Mosquito   133 AHRISASHAICAPLTWQQGDLRRPYPTDIEMRLGFLGKSDLNINGHNLQHPNS--LNEMHRNAS- 194

  Fly   193 SAGSGSGSGAGGEVPNAFQNQFNWN-LGELHMTMGASGNTVALETRA-----QDDVEVMSTDSSS 251
            :.|:|   ||||::|.:..|||.|: .|||||:|||...:|:|:|||     |||||||||:|||
Mosquito   195 TVGAG---GAGGDIPASAPNQFAWHPSGELHMSMGAGAGSVSLDTRAHKDASQDDVEVMSTESSS 256

  Fly   252 SSSSDSQ 258
            |||||||
Mosquito   257 SSSSDSQ 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED4NP_648094.1 Med4 47..189 CDD:401849 89/141 (63%)
MED4XP_309615.3 Med4 44..210 CDD:401849 101/165 (61%)

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