DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc27 and lapB

DIOPT Version :10

Sequence 1:NP_648093.2 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_415796.1 Gene:lapB / 944858 ECOCYCID:EG12691 Length:389 Species:Escherichia coli


Alignment Length:247 Identity:50/247 - (20%)
Similarity:93/247 - (37%) Gaps:48/247 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   636 DLINQDKTSPVTWCVSGNCFSLQKEHETAIKFFKRAVQVDPDFVYSYTL-----LGHELVLTEEF 695
            |::.:|..:.......||.|..:.|.:.||:..:..:: .....|...|     ||.:.:....:
E. coli    60 DMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLME-SASLTYEQRLLAIQQLGRDYMAAGLY 123

  Fly   696 DKAMDYFRAAVVRDPRHYNAWYGIGTIYSKQEKYELAEIHYVKALKINPQNSVILVHIG------ 754
            |:|.|.|..  :.|...:.    ||.:....:.|: |...:.||:.:..:    ||.:|      
E. coli   124 DRAEDMFNQ--LTDETDFR----IGALQQLLQIYQ-ATSEWQKAIDVAER----LVKLGKDKQRV 177

  Fly   755 ---------AMQFYMKKKDL--SLQTLNTAATLDPKNPLTRFHRGSIYFSLGKYQEALRELEEL- 807
                     |:| :|...||  ::..|...|..|..:.......|.::.:.|:|.:|:..|:.: 
E. coli   178 EIAHFYCELALQ-HMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRVI 241

  Fly   808 ---KEVVPKESVVFYLIGKIHKTLGNMDLALMHFSWATDLDPKGANNQIKDA 856
               :|:|   |....::...::.||..      ..||..|......|...||
E. coli   242 SQDRELV---SETLEMLQTCYQQLGKT------AEWAEFLQRAVEENTGADA 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_648093.2 ANAPC3 16..94 CDD:463743
BepA 38..168 CDD:443813
TPR repeat 68..104 CDD:276809
TPR repeat 109..143 CDD:276809
Spy 540..>753 CDD:443119 25/121 (21%)
TPR repeat 582..605 CDD:276809
TPR 652..>809 CDD:440225 37/182 (20%)
TPR repeat 678..708 CDD:276809 8/34 (24%)
TPR repeat 713..741 CDD:276809 6/27 (22%)
TPR repeat 747..773 CDD:276809 9/42 (21%)
TPR 776..>850 CDD:440225 14/77 (18%)
TPR repeat 781..809 CDD:276809 5/31 (16%)
TPR repeat 815..838 CDD:276809 3/22 (14%)
lapBNP_415796.1 PRK11788 10..389 CDD:236983 50/247 (20%)
TPR repeat 68..98 CDD:276809 6/30 (20%)
TPR repeat 103..132 CDD:276809 8/28 (29%)
TPR repeat 141..169 CDD:276809 7/32 (22%)
TPR repeat 180..208 CDD:276809 6/28 (21%)
TPR repeat 213..243 CDD:276809 5/29 (17%)
TPR repeat 248..277 CDD:276809 7/37 (19%)
Blue background indicates that the domain is not in the aligned region.

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