DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc27 and CDC16

DIOPT Version :10

Sequence 1:NP_648093.2 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_012903.1 Gene:CDC16 / 853846 SGDID:S000001505 Length:840 Species:Saccharomyces cerevisiae


Alignment Length:864 Identity:156/864 - (18%)
Similarity:315/864 - (36%) Gaps:196/864 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTDVFNTCQGSS--VNANAMVLFGAEQQGQQHQER 203
            :|...:..|.:..:|  |:           :|..:.:.:.:|  .::|.:::.......:||.:.
Yeast     1 MKFCLYCCHCYIVIC--GK-----------ATHYYKSSKATSNLKSSNRVLMRNPMSPSEQHSQH 52

  Fly   204 QSLITNLSNVSNYIL-----TTPVDQQQQQINQNQN------------------QHHNSNMVTPI 245
            .|.:.....|||...     :.|.|.|..::.|..|                  |...:|::||.
Yeast    53 NSTLAASPFVSNVSAARTQQSLPTDAQNDRLQQPWNRTNTATSPYQSLANSPLIQKLQANIMTPH 117

  Fly   246 NNNNNNNNLNSSISMLRGGLVQNSSMLAMLEDTPMGAPQDPA--------GQYQ----------- 291
            ..:.|:|:.::||:   |.:|.::::||.:....|.....|:        .:|:           
Yeast   118 QPSANSNSNSNSIT---GNVVNDNNLLASMSKNSMFGSTIPSTLRKVSLQREYKDSVDGVVRDED 179

  Fly   292 QNQQLY---DMSSGTPFRKQFKYLSAISPPTPSFGIMPLTSPCTGNDGSFIG------------- 340
            .::.::   |.::.....::.| |....|.|.:  .:..|:..|..|.|.:.             
Yeast   180 NDEDVHNNGDAAANANNDRESK-LGHNGPLTTT--TLTTTTTATQLDVSELSAIERLRLWRFDAL 241

  Fly   341 -NH---------TPVMNISYSP-----MPQMLVEVNQEPKMMGKKLKTHVGGL------------ 378
             .|         ..|.|||..|     :.|:....||..:.:....:.::.|:            
Yeast   242 MQHMYRTAEYIADKVYNISNDPDDAFWLGQVYYNNNQYVRAVELITRNNLDGVNILCRYLLGLSF 306

  Fly   379 --INRKEGSLN-----KPAVFTQAGNITPRTPNNNNVGNNGNMNVPPNPNAAVRRSSRLF--SNS 434
              :.|.:.:|:     .|  |::..:.|.....:|| |||.|.:.|.........||..|  ...
Yeast   307 VKLQRFDDALDVIGEYNP--FSEDPSTTAANTMSNN-GNNSNTSQPVTDGGIKMESSLCFLRGKI 368

  Fly   435 YSVKEN-NKSPNIANKFVQPRSPPRKAKSRMTKICLNN----ELIEDKSHHLSEKRKEKVETITS 494
            |..:.| ||:              |.|......:.:.|    |::..|:....::..:..:::..
Yeast   369 YFAQNNFNKA--------------RDAFREAILVDIKNFEAFEMLLSKNLLTPQEEWDLFDSLDF 419

  Fly   495 SGANNNSGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLKKQSADGLMALLRGLAEAYQLLSNFQCK 559
                     :...|:.:::.|         .:::...|..:.:.:......||:.|:|..|... 
Yeast   420 ---------KEFGEDKEIMKN---------LYKINLSKYINTEDITKSNEILAKDYKLADNVDV- 465

  Fly   560 AAIKQLETTIPKHHLNSSWVQSLIGLARYEMREYEAAVAIFETIHKTEPCRLDYMEIYSSSLWHL 624
                               |:|.:.:. |...::...:.:.||:.:.:....:.:..|...|:.|
Yeast   466 -------------------VRSKVDIC-YTQCKFNECLELCETVLENDEFNTNILPAYIGCLYEL 510

  Fly   625 QREVELSALAQDLINQDKTSPVTW-CVSGNCFSLQKEHETAIKFFKRAVQVDPDFVYSYTLLGHE 688
            ..:.:|..|:..|......|.:|| .|:....||.:..| |.|::.::..:||.|..::....|.
Yeast   511 SNKNKLFLLSHRLAETFPKSAITWFSVATYYMSLDRISE-AQKYYSKSSILDPSFAAAWLGFAHT 574

  Fly   689 LVLTEEFDKAMDYFRAAVVRDPRHYNAWYGIGTIYSKQEKYELAEIHYVKALKINPQNSVILVHI 753
            ..|..|.|:|:..:..|....|..:.....:|..:.......|||.::|.|..|.|.:.::|..:
Yeast   575 YALEGEQDQALTAYSTASRFFPGMHLPKLFLGMQFMAMNSLNLAESYFVLAYDICPNDPLVLNEM 639

  Fly   754 GAMQF----YMKKKDLSLQTLNTAATLDPKNPLT---RFHRGSIYFSLGKYQEALRELEELKEVV 811
            |.|.|    ::|.|....:.|.....|||.:..|   :.:.|..|..|.:.:.|::....:.|..
Yeast   640 GVMYFKKNEFVKAKKYLKKALEVVKDLDPSSRTTISIQLNLGHTYRKLNENEIAIKCFRCVLEKN 704

  Fly   812 PKESVVFYLIGKIHKTLGNMDLALMHFSWATDLDP--KGANNQIKDAFDSMAHPSCCPANTTALD 874
            .|.|.:...:|.::.....:..|:.|...:..|.|  ..|...:|:|.:...        |.:||
Yeast   705 DKNSEIHCSLGYLYLKTKKLQKAIDHLHKSLYLKPNNSSATALLKNALELNV--------TLSLD 761

  Fly   875 VDLEPTSERSDDSTQAQQD 893
            .. .|..::|:..:||.:|
Yeast   762 AS-HPLIDKSNLMSQASKD 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_648093.2 ANAPC3 16..94 CDD:463743
BepA 38..168 CDD:443813 4/26 (15%)
TPR repeat 68..104 CDD:276809
TPR repeat 109..143 CDD:276809 0/1 (0%)
Spy 540..>753 CDD:443119 44/213 (21%)
TPR repeat 582..605 CDD:276809 3/22 (14%)
TPR 652..>809 CDD:440225 38/163 (23%)
TPR repeat 678..708 CDD:276809 7/29 (24%)
TPR repeat 713..741 CDD:276809 6/27 (22%)
TPR repeat 747..773 CDD:276809 7/29 (24%)
TPR 776..>850 CDD:440225 16/78 (21%)
TPR repeat 781..809 CDD:276809 5/30 (17%)
TPR repeat 815..838 CDD:276809 3/22 (14%)
CDC16NP_012903.1 ANAPC3 242..322 CDD:463743 12/79 (15%)
TPR repeat 295..322 CDD:276809 2/26 (8%)
TPR repeat 327..386 CDD:276809 17/73 (23%)
TPR_2 361..389 CDD:429619 7/41 (17%)
TPR repeat 530..560 CDD:276809 9/30 (30%)
LapB 531..753 CDD:442196 52/222 (23%)
TPR repeat 565..591 CDD:276809 5/25 (20%)
TPR repeat 598..628 CDD:276809 6/29 (21%)
TPR repeat 633..665 CDD:276809 7/31 (23%)
TPR repeat 678..702 CDD:276809 4/23 (17%)
TPR repeat 707..737 CDD:276809 4/29 (14%)
Blue background indicates that the domain is not in the aligned region.

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