DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc27 and CDC27

DIOPT Version :9

Sequence 1:NP_001261503.1 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_009469.2 Gene:CDC27 / 852194 SGDID:S000000180 Length:758 Species:Saccharomyces cerevisiae


Alignment Length:890 Identity:233/890 - (26%)
Similarity:367/890 - (41%) Gaps:208/890 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMIQEPVQAAIWHCLNYYDFKDAVFLSERL---CSEVES-----DETIFLLATSYFRSNQVHQAY 57
            :.:|:.:|.||.. |||   ..|.||:|.|   ||.::.     .:.::|.|.|.|.:...|.|:
Yeast    28 IQLQDCIQQAIQQ-LNY---STAEFLAELLYAECSILDKSSVYWSDAVYLYALSLFLNKSYHTAF 88

  Fly    58 WLLKEKARRSPQCRFLQAKCAYELKK-YAEAESALISTGFADAKNCDELQ------------RDF 109
            .:.||.........::..:||.:|.: ..||...|:|.....:.|....:            .|.
Yeast    89 QISKEFKEYHLGIAYIFGRCALQLSQGVNEAILTLLSIINVFSSNSSNTRINMVLNSNLVHIPDL 153

  Fly   110 GDLACFAYQLMAQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTDV 174
            ..|.|    |:..:.|:.:.:|........||.:||::|.::..:|.:....|...:|       
Yeast   154 ATLNC----LLGNLYMKLDHSKEGAFYHSEALAINPYLWESYEAICKMRATVDLKRVF------- 207

  Fly   175 FNTC--QGSSVNANAMVLFGAEQQGQQHQERQSLITNLSNVSNYILTTPVDQQQQQINQNQNQHH 237
            |:..  :.:|.|.||...|.:              |:||:..      |..|.......|:|   
Yeast   208 FDIAGKKSNSHNNNAASSFPS--------------TSLSHFE------PRSQPSLYSKTNKN--- 249

  Fly   238 NSNMVTPINNNNNNNNLNSSISMLRGGLVQNSSMLAMLEDTPMGAPQDPAGQY-------QQNQQ 295
                    .|||.|||:|:        |.|:|:          ..|...|..:       :..||
Yeast   250 --------GNNNINNNVNT--------LFQSSN----------SPPSTSASSFSSIQHFSRSQQQ 288

  Fly   296 LYDMSSGTPFRKQFKYLSAISPPTPSFGIMPLTSPCTGNDGSFIGNHTPVMNI----SYSPMPQM 356
            ..:.|..|...|..:     :|..|:  |...||....|:.|        ||:    |..|....
Yeast   289 QANTSIRTCQNKNTQ-----TPKNPA--INSKTSSALPNNIS--------MNLVSPSSKQPTISS 338

  Fly   357 LVEVNQEPKMMGKKLKTHVGGLINRKEGSLNKPAVFTQAGNITPRTPNNNNVGNNGNMNVPPNPN 421
            |.:|....|:    |.|....|:|......|                ||||..||.|.|   |.|
Yeast   339 LAKVYNRNKL----LTTPPSKLLNNDRNHQN----------------NNNNNNNNNNNN---NNN 380

  Fly   422 AAVRRSSRLFSNSYSVKENNKSPNIANK--FVQPRSPPRKAKSRMTKICLNNELIEDKSHHLSEK 484
                            ..||.:.||.||  |..||                       :.:.|..
Yeast   381 ----------------NNNNNNNNIINKTTFKTPR-----------------------NLYSSTG 406

  Fly   485 RKEKVETITSSGANNNSGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLKKQSADGLMALLRGLAEA 549
            |      :|:|..|..|          ::::||:            |....:..|..::...|..
Yeast   407 R------LTTSKKNPRS----------LIISNSI------------LTSDYSITLPEIMYNFALI 443

  Fly   550 YQLLSNFQCKAAIKQLETTIPKHHLNS-SWVQSLIGLARYEMREYEAAVAIFETIHKTEPCRLDY 613
            .:..|.:....||:..|:.||.|..:: .|....:|...:|:..|:.::..|..:...:|.|:..
Yeast   444 LRSSSQYNSFKAIRLFESQIPSHIKDTMPWCLVQLGKLHFEIINYDMSLKYFNRLKDLQPARVKD 508

  Fly   614 MEIYSSSLWHLQREVELSALAQDLINQDKTSPVTWCVSGNCFSLQKEHETAIKFFKRAVQVDPDF 678
            |||:|:.||||..:|:.|.||..|::.....|.|||..||..||||:|:.|||.|::|.|:||:|
Yeast   509 MEIFSTLLWHLHDKVKSSNLANGLMDTMPNKPETWCCIGNLLSLQKDHDAAIKAFEKATQLDPNF 573

  Fly   679 VYSYTLLGHELVLTEEFDKAMDYFRAAVVRDPRHYNAWYGIGTIYSKQEKYELAEIHYVKALKIN 743
            .|:|||.|||....:..|.|...:|.|:..||:||||:||:||...|..:||.|.:::.||..||
Yeast   574 AYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYYGLGTSAMKLGQYEEALLYFEKARSIN 638

  Fly   744 PQNSVILVHIGAMQFYMKKKDLSLQTLNTAATLDPKNPLTRFHRGSIYFSLGKYQEALRELEELK 808
            |.|.|::...|.....:..|:.:||....|..|.|.:.|:::..|.:.:|:.:|..||:..|||.
Yeast   639 PVNVVLICCCGGSLEKLGYKEKALQYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELV 703

  Fly   809 EVVPKESVVFYLIGKIHKTLGNMDLALMHFSWATDLDPKGANNQI 853
            ::||.::...||:|:.::.:|....|:...:.|.:|||||  ||:
Yeast   704 KLVPDDATAHYLLGQTYRIVGRKKDAIKELTVAMNLDPKG--NQV 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_001261503.1 ANAPC3 16..94 CDD:289650 23/86 (27%)
TPR_11 67..145 CDD:290150 16/90 (18%)
TPR repeat 68..104 CDD:276809 8/36 (22%)
TPR repeat 109..143 CDD:276809 7/33 (21%)
TPR_12 539..601 CDD:290160 13/62 (21%)
TPR repeat 582..605 CDD:276809 4/22 (18%)
TPR 590..850 CDD:223533 98/259 (38%)
TPR_1 645..678 CDD:278916 19/32 (59%)
TPR repeat 678..708 CDD:276809 12/29 (41%)
TPR_1 713..746 CDD:278916 16/32 (50%)
TPR repeat 713..741 CDD:276809 13/27 (48%)
TPR repeat 747..773 CDD:276809 5/25 (20%)
TPR repeat 781..809 CDD:276809 9/27 (33%)
TPR repeat 815..838 CDD:276809 5/22 (23%)
CDC27NP_009469.2 ANAPC3 39..126 CDD:403946 24/90 (27%)
TPR repeat 434..466 CDD:276809 7/31 (23%)
TPR repeat 472..500 CDD:276809 5/27 (19%)
PEP_TPR_lipo <500..>741 CDD:274350 92/240 (38%)
TPR repeat 540..568 CDD:276809 16/27 (59%)
TPR repeat 573..603 CDD:276809 12/29 (41%)
TPR repeat 608..634 CDD:276809 11/25 (44%)
TPR repeat 642..668 CDD:276809 5/25 (20%)
TPR repeat 676..704 CDD:276809 9/27 (33%)
TPR repeat 710..737 CDD:276809 5/26 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343858
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1126
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57830
OrthoFinder 1 1.000 - - FOG0004432
OrthoInspector 1 1.000 - - oto100262
orthoMCL 1 0.900 - - OOG6_101939
Panther 1 1.100 - - LDO PTHR12558
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R70
SonicParanoid 1 1.000 - - X3140
TreeFam 1 0.960 - -
1211.740

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