DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc27 and CDC27a

DIOPT Version :10

Sequence 1:NP_648093.2 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_001319567.1 Gene:CDC27a / 820879 AraportID:AT3G16320 Length:728 Species:Arabidopsis thaliana


Alignment Length:856 Identity:227/856 - (26%)
Similarity:383/856 - (44%) Gaps:192/856 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRSNQVHQAYWLLKEKARRSPQCRFLQAKCAY 79
            ||::.|.:|:||.|.|.::..|:..:.|||..|..::|.:.||::|  |..::||.|:|.|...:
plant    14 LNHFMFTNAIFLCELLLAQFPSEVNLQLLARCYLSNSQAYSAYYIL--KGSKTPQSRYLFAFSCF 76

  Fly    80 ELKKYAEAESALISTGFADAKNCDELQRDFGDLACFAYQLMAQICMRTERNKLAVSALRRALKLN 144
            :|....|||:||:.        |::...:....|...| |:..|...:.|...::...|.||..:
plant    77 KLDLLGEAEAALLP--------CEDYAEEVPGGAAGHY-LLGLIYRYSGRKNCSIQQFRMALSFD 132

  Fly   145 PFMWHAFADLCLLGQDTDAAAIF-QIHSTDVFNTCQGSSVNANAMVLFGAEQQGQQHQERQSLIT 208
            |..|.|:.:||.||...:|:.:| .:.|..:..||                              
plant   133 PLCWEAYGELCSLGAAEEASTVFGNVASQRLQKTC------------------------------ 167

  Fly   209 NLSNVSNYILTTPVDQQQQQINQNQNQHHNSNMVTPINNNNNNNNLNSSISMLRGGLV-QNSSML 272
                         |:|:                                ||...|..: |.:...
plant   168 -------------VEQR--------------------------------ISFSEGATIDQITDSD 187

  Fly   273 AMLEDTPMGAPQDPAGQYQQNQQLYDMSSGTPFRKQFKYLSAISPPTPSFGIMPLTSPCTGNDGS 337
            ..|:||.:...:...|:.||:.::.......|                     |.|......:|.
plant   188 KALKDTGLSQTEHIPGENQQDLKIMQQPGDIP---------------------PNTDRQLSTNGW 231

  Fly   338 FIGNHTPVMNISYSPMPQMLVEVNQEPKMMGKKLKTHVGGLINRKEGSLNKPAVFTQAGNITPRT 402
            .:...:||:......:|.:|::..:.|.:.|..:..| |..:.|:.       .|::        
plant   232 DLNTPSPVLLQVMDALPPLLLKNMRRPAVEGSLMSVH-GVRVRRRN-------FFSE-------- 280

  Fly   403 PNNNNVGNNGNMNVPPNPNAAVRRSSRL-------FSNSY---------SVKENNKSPNIANKFV 451
                      .::......:..|||:|:       .|.|:         |..|:|.:|::::.. 
plant   281 ----------ELSAEAQEESGRRRSARIAARKKNPMSQSFGKDSHWLHLSPSESNYAPSLSSMI- 334

  Fly   452 QPRSPPRKAKSRMTKICLNNELIEDKSHHLSEKRKEKVETI------TSSGANNNSGGRSAAEEA 510
                    .|.|:..   :.|:|.|              |:      |:||.:.:..|.|..:|.
plant   335 --------GKCRIQS---SKEVIPD--------------TVTLNDPATTSGQSVSDIGSSVDDEE 374

  Fly   511 KVLLNNSLNNAQTMAHQLMGLKKQSADGLMALLRGLAEAYQLLSNFQCKAAIKQLETTIPKHHLN 575
            |   :|...::......:.|:.:     :::||:.|.:.::.|..::|:.|:...:....|.: |
plant   375 K---SNPSESSPDRFSLISGISE-----VLSLLKILGDGHRHLHMYKCQEALLAYQKLSQKQY-N 430

  Fly   576 SSWVQSLIGLARYEMREYEAAVAIFETIHKTEPCRLDYMEIYSSSLWHLQREVELSALAQDLINQ 640
            :.||...:|.|.:|:::|..|.:.|...|:..|..|:.|:.||:.|:||:.|:.|..|||:||:.
plant   431 THWVLMQVGKAYFELQDYFNADSSFTLAHQKYPYALEGMDTYSTVLYHLKEEMRLGYLAQELISV 495

  Fly   641 DKTSPVTWCVSGNCFSLQKEHETAIKFFKRAVQVDPDFVYSYTLLGHELVLTEEFDKAMDYFRAA 705
            |:.||.:||..|||:||:|:|:||:|.|:||:|::..|.|::||.|||....|||:.|...:|.|
plant   496 DRLSPESWCAVGNCYSLRKDHDTALKMFQRAIQLNERFTYAHTLCGHEFAALEEFEDAERCYRKA 560

  Fly   706 VVRDPRHYNAWYGIGTIYSKQEKYELAEIHYVKALKINPQNSVILVHIGAMQFYMKKKDLSLQTL 770
            :..|.||||||||:|..|.:|||:|.|:..:..||:|||::|||:.:.|......|:.|.:|..:
plant   561 LGIDTRHYNAWYGLGMTYLRQEKFEFAQHQFQLALQINPRSSVIMCYYGIALHESKRNDEALMMM 625

  Fly   771 NTAATLDPKNPLTRFHRGSIYFSLGKYQEALRELEELKEVVPKESVVFYLIGKIHKTLGNMDLAL 835
            ..|...|.||||.::::..|..|||.|.:|.:.||||||..|:||.|...:|||:..|...|.|:
plant   626 EKAVLTDAKNPLPKYYKAHILTSLGDYHKAQKVLEELKECAPQESSVHASLGKIYNQLKQYDKAV 690

  Fly   836 MHFSWATDLDP 846
            :||..|.||.|
plant   691 LHFGIALDLSP 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_648093.2 ANAPC3 16..94 CDD:463743 28/77 (36%)
BepA 38..168 CDD:443813 38/130 (29%)
TPR repeat 68..104 CDD:276809 12/35 (34%)
TPR repeat 109..143 CDD:276809 8/33 (24%)
Spy 540..>753 CDD:443119 88/212 (42%)
TPR repeat 582..605 CDD:276809 6/22 (27%)
TPR 652..>809 CDD:440225 71/156 (46%)
TPR repeat 678..708 CDD:276809 13/29 (45%)
TPR repeat 713..741 CDD:276809 14/27 (52%)
TPR repeat 747..773 CDD:276809 7/25 (28%)
TPR 776..>850 CDD:440225 33/71 (46%)
TPR repeat 781..809 CDD:276809 12/27 (44%)
TPR repeat 815..838 CDD:276809 8/22 (36%)
CDC27aNP_001319567.1 ANAPC3 15..91 CDD:463743 28/85 (33%)
Spy 65..>155 CDD:443119 28/98 (29%)
TPR 402..>561 CDD:440225 61/159 (38%)
LapB 490..721 CDD:442196 97/212 (46%)
TPR repeat 500..528 CDD:276809 16/27 (59%)
TPR repeat 533..563 CDD:276809 13/29 (45%)
TPR repeat 568..596 CDD:276809 14/27 (52%)
TPR repeat 602..629 CDD:276809 7/26 (27%)
TPR repeat 636..664 CDD:276809 12/27 (44%)
TPR repeat 670..698 CDD:276809 11/27 (41%)

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