DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc27 and HBT

DIOPT Version :9

Sequence 1:NP_001261503.1 Gene:Cdc27 / 38798 FlyBaseID:FBgn0012058 Length:900 Species:Drosophila melanogaster
Sequence 2:NP_849994.1 Gene:HBT / 816519 AraportID:AT2G20000 Length:744 Species:Arabidopsis thaliana


Alignment Length:911 Identity:262/911 - (28%)
Similarity:419/911 - (45%) Gaps:205/911 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VQAAIWHCLN----YYDFKDAVFLSERLCSEVESDETIFLLATSYFRSNQVHQAYWLLKEKARRS 67
            ::|.:..|:|    ::.:|:|:|:.||||:|..|:..:.||||||.::||.:.||.||  |..:.
plant     1 MEAMLVDCVNNSLRHFVYKNAIFMCERLCAEFPSEVNLQLLATSYLQNNQAYSAYHLL--KGTQM 63

  Fly    68 PQCRFLQAKCAYELKKYAEAESAL--ISTGFADAKNCDELQRDFGDLACFAYQLMAQICMRTERN 130
            .|.|:|.|...:::....||||||  ::...|:..|           ....:.|:..|...|:|.
plant    64 AQSRYLFALSCFQMDLLNEAESALCPVNEPGAEIPN-----------GAAGHYLLGLIYKYTDRR 117

  Fly   131 KLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTDVFNTCQGSSVNANAMVLFGAEQ 195
            |.|....:::|.::|.:|.|:.:||:||...:|.|:|                 .....|...:|
plant   118 KNAAQQFKQSLTIDPLLWAAYEELCILGAAEEATAVF-----------------GETAALSIQKQ 165

  Fly   196 QGQQ----------HQERQSLITNLSNVSNYILTTPVDQQQQQINQNQNQHHNSNMVTPINNNNN 250
            ..||          ::||.|  |:..|.|:           :..:..|::|..|:.:..|:.|.:
plant   166 YMQQLSTSLGLNTYNEERNS--TSTKNTSS-----------EDYSPRQSKHTQSHGLKDISGNFH 217

  Fly   251 NNNLNSSISMLRGGLVQNSSMLAMLEDTPMGAPQDPAGQYQQNQQLYDMSSGTPFRKQFKYLSAI 315
            ::.:|..:|                                 |...|:..|  |...|   ||.|
plant   218 SHGVNGGVS---------------------------------NMSFYNTPS--PVAAQ---LSGI 244

  Fly   316 SPPTPSFGIMPL---TSPCTGNDGSFIGNHTPVMNISYSPMPQMLVEVNQEPKMMGKKLKTHVGG 377
            :||       ||   ..|...|..|.|.:.:|...::         ...|.|:            
plant   245 APP-------PLFRNFQPAVANPNSLITDSSPKSTVN---------STLQAPR------------ 281

  Fly   378 LINRK---EGSLNKPA--VFTQAGNITPRTPNNNNVGNNGNMNVPPNPNAAVRRSSRLFSNS--- 434
               ||   ||.|.|.:  :|:.:|                           .||||||.::|   
plant   282 ---RKFVDEGKLRKISGRLFSDSG---------------------------PRRSSRLSADSGAN 316

  Fly   435 --YSVKENNKSPNIANKFVQPRSPPRKAKSRMTKICLNNELIEDKSHHLSEKRKEKV--ETITSS 495
              .||...:.:.|.|:|::        ..|:::.:.|.:..:.......:|...|.|  |....|
plant   317 INSSVATVSGNVNNASKYL--------GGSKLSSLALRSVTLRKGHSWANENMDEGVRGEPFDDS 373

  Fly   496 GANNNSGGRSAA----EEAKVLLNNSLNNAQTMAHQLMGLKKQSADGLMALLRGLAEAYQLLSNF 556
            ..|..|...|.|    |:..:.:.....::||:.   :|:.:     ::.|||.|.|..:|...:
plant   374 RPNTASTTGSMASNDQEDETMSIGGIAMSSQTIT---IGVSE-----ILNLLRTLGEGCRLSYMY 430

  Fly   557 QCKAAIKQLET--TIPKHHLNSSWVQSLIGLARYEMREYEAAVAIFETIHKTEPCRLDYMEIYSS 619
            :|:.|   |:|  .:|..|.|:.||.|.:|.|.:|:.:|..|...|.......|..|:.|:|||:
plant   431 RCQEA---LDTYMKLPHKHYNTGWVLSQVGKAYFELIDYLEAEKAFRLARLASPYCLEGMDIYST 492

  Fly   620 SLWHLQREVELSALAQDLINQDKTSPVTWCVSGNCFSLQKEHETAIKFFKRAVQVDPDFVYSYTL 684
            .|:||:.:::||.|||:||:.|:.:|.:||..|||:||||:||||:|.|.||||::|.|.|::||
plant   493 VLYHLKEDMKLSYLAQELISTDRLAPQSWCAMGNCYSLQKDHETALKNFLRAVQLNPRFAYAHTL 557

  Fly   685 LGHELVLTEEFDKAMDYFRAAVVRDPRHYNAWYGIGTIYSKQEKYELAEIHYVKALKINPQNSVI 749
            .|||....|:|:..|..::.|:..|.||||||||:|.||.:|||.|.:|.|:..|..|||.:|||
plant   558 CGHEYTTLEDFENGMKSYQNALRVDTRHYNAWYGLGMIYLRQEKLEFSEHHFRMAFLINPSSSVI 622

  Fly   750 LVHIGAMQFYMKKKDLSLQTLNTAATLDPKNPLTRFHRGSIYFSLGKYQEALRELEELKEVVPKE 814
            :.::|.....:|:.:.:|:.:..|...|.||||..:.:.:|...|.:..|||..||||||..|.|
plant   623 MSYLGTSLHALKRSEEALEIMEQAIVADRKNPLPMYQKANILVCLERLDEALEVLEELKEYAPSE 687

  Fly   815 SVVFYLIGKIHKTLGNMDLALMHFSWATDLDPKGAN-NQIKDAFDSMAHPSCCPANTTALDVDLE 878
            |.|:.|:|:|:|.....|.|::||..|.|:.|...: ..||.|.:.:..|.         ::|..
plant   688 SSVYALMGRIYKRRNMHDKAMLHFGLALDMKPPATDVAAIKAAMEKLHVPD---------EIDES 743

  Fly   879 P 879
            |
plant   744 P 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc27NP_001261503.1 ANAPC3 16..94 CDD:289650 33/83 (40%)
TPR_11 67..145 CDD:290150 19/79 (24%)
TPR repeat 68..104 CDD:276809 12/37 (32%)
TPR repeat 109..143 CDD:276809 7/33 (21%)
TPR_12 539..601 CDD:290160 21/63 (33%)
TPR repeat 582..605 CDD:276809 6/22 (27%)
TPR 590..850 CDD:223533 112/259 (43%)
TPR_1 645..678 CDD:278916 21/32 (66%)
TPR repeat 678..708 CDD:276809 11/29 (38%)
TPR_1 713..746 CDD:278916 19/32 (59%)
TPR repeat 713..741 CDD:276809 16/27 (59%)
TPR repeat 747..773 CDD:276809 6/25 (24%)
TPR repeat 781..809 CDD:276809 11/27 (41%)
TPR repeat 815..838 CDD:276809 8/22 (36%)
HBTNP_849994.1 ANAPC3 15..88 CDD:403946 31/74 (42%)
KAR9 <226..387 CDD:369971 51/264 (19%)
TPR 452..715 CDD:223533 114/262 (44%)
TPR repeat 518..546 CDD:276809 18/27 (67%)
TPR repeat 551..581 CDD:276809 11/29 (38%)
TPR repeat 586..612 CDD:276809 15/25 (60%)
TPR repeat 620..647 CDD:276809 6/26 (23%)
TPR repeat 654..682 CDD:276809 11/27 (41%)
TPR repeat 688..716 CDD:276809 11/27 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 75 1.000 Domainoid score I3195
eggNOG 1 0.900 - - E2759_KOG1126
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H960
Inparanoid 1 1.050 335 1.000 Inparanoid score I668
OMA 1 1.010 - - QHG57830
OrthoDB 1 1.010 - - D280620at2759
OrthoFinder 1 1.000 - - FOG0004432
OrthoInspector 1 1.000 - - otm3228
orthoMCL 1 0.900 - - OOG6_101939
Panther 1 1.100 - - LDO PTHR12558
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3140
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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